KitwareMedical

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149 repositories

py-undo-stack
Public
Pure python Undo / Redo command stack
BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Apr 11, 2025Apr 11, 2025
trame-slicer
Public
Bring the capabilities of 3D Slicer to the web with modern UI using the trame framework!
vue medical-imaging 3d-slicer trame
Python
•
Other
•3•9•0•0•Updated Apr 8, 2025Apr 8, 2025
slicer-extensions-webapp
Public
Source code of the site allowing to browse and download Slicer extensions. This site is published at extensions.slicer.org and maintained by @Kitware on behalf of the 3D Slicer community.
3d-slicer
Vue
•
Apache License 2.0
•2•2•13•9•Updated Apr 8, 2025Apr 8, 2025
GirderEEGViewer
Public
trame based viewer to visualize and annotate EEG files stored on a Girder data management platform
Apache License 2.0
•0•0•0•0•Updated Apr 1, 2025Apr 1, 2025
ITKUltrasound
Public
ITK module with classes particularly useful for ultrasound.
python c-plus-plus itk ultrasound arfi scan-conversion b-mode ultrasound-tissue-characterization strain-imaging uspect
C++
•
Apache License 2.0
•22•52•13•8•Updated Mar 31, 2025Mar 31, 2025
SlicerPythonTestRunner
Public
Python test runner extension for 3D Slicer based on PyTest and PyTest JSON Report
3d-slicer-extension
Python
•
BSD 3-Clause "New" or "Revised" License
•1•3•3•0•Updated Mar 27, 2025Mar 27, 2025
GirderBIDS
Public
Girder plugin to import a BIDS database
Python
•
Apache License 2.0
•2•0•0•0•Updated Mar 26, 2025Mar 26, 2025
SlicerCustomAppTemplate
Public
Template to be used as a starting point for creating a custom 3D Slicer application
python c-plus-plus cross-platform image-processing registration segmentation vtk itk medical-image-computing 3d-slicer
C++
•
Apache License 2.0
•25•55•16•3•Updated Mar 25, 2025Mar 25, 2025
GirderMedViewer
Public
Python
•
Other
•2•0•0•0•Updated Mar 17, 2025Mar 17, 2025
ITKContourInterpolation
Public
An implementation of morphological contour interpolation
segmentation interpolation-methods itk-module
C++
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Apache License 2.0
•13•32•2•0•Updated Mar 14, 2025Mar 14, 2025
VolViewCustomAppTemplate
Public
VolView custom app template using file overrides to customize a webapp built using Vite
volview-custom-application
TypeScript
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Apache License 2.0
•2•3•1•0•Updated Mar 11, 2025Mar 11, 2025
HASI
Public
High-throughput Applications for Skeletal Imaging
Python
•
Apache License 2.0
•8•7•8•4•Updated Mar 10, 2025Mar 10, 2025
dicom-exporter
Public
DICOM file converter in Python
python dicom itk vtk-js
Python
•
BSD 3-Clause "New" or "Revised" License
•6•13•1•0•Updated Feb 24, 2025Feb 24, 2025
ITKIOScanco
Public
ITK Image IO for Scanco MicroCT .ISQ files
imaging micro-ct itk-module scanco
C++
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Apache License 2.0
•14•13•2•5•Updated Feb 3, 2025Feb 3, 2025
SlicerTrame
Public
3D Slicer extension to launch trame-slicer server directly from 3D Slicer
3d-slicer-extension
CMake
•
BSD 3-Clause "New" or "Revised" License
•1•4•1•0•Updated Jan 31, 2025Jan 31, 2025
ITKStrain
Public
ITK filters to estimate a strain tensor field from a displacement field or a spatial transformation.
itk strain-imaging strain-tensor itk-module
C++
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Apache License 2.0
•11•10•2•0•Updated Jan 28, 2025Jan 28, 2025
ITKPhaseSymmetry
Public
Multi-scale Steerable Phase-Symmetry Filters for ITK
itk imaging phase-analysis itk-module
C++
•
Apache License 2.0
•13•2•0•0•Updated Jan 27, 2025Jan 27, 2025
ITKRLEImage
Public
Run-length encoded memory compression scheme for an itk::Image
run-length-encoding itk imaging itk-module
C++
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Apache License 2.0
•9•4•1•0•Updated Jan 27, 2025Jan 27, 2025
dicom-anonymizer
Public
Tool to anonymize DICOM files according to the DICOM standard
Python
•
BSD 3-Clause "New" or "Revised" License
•50•121•8•0•Updated Jan 20, 2025Jan 20, 2025
SlicerNNUnet
Public
3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.
machine-learning medical-imaging 3d-slicer-extension nnunet
Python
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BSD 3-Clause "New" or "Revised" License
•7•34•8•0•Updated Jan 15, 2025Jan 15, 2025
CourseInBiomedicalImageAnalysisAndVisualization
Public
Kitware Course in Biomedical Image Analysis and Visualization: ITK
Jupyter Notebook
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Apache License 2.0
•7•16•0•1•Updated Jan 3, 2025Jan 3, 2025
ITK
Public
Fork to maintain topics specific to @KitwareMedical projects like Slicer Custom Application or Extension that will eventually be contributed back
3d-slicer-fork
Apache License 2.0
•692•0•0•0•Updated Dec 11, 2024Dec 11, 2024
otm-server
Public
hacktoberfest
Python
•
Apache License 2.0
•2•0•27•0•Updated Dec 9, 2024Dec 9, 2024
mop
Public archive
R Package for Multiscale Optimal Transport
C++
•3•0•0•0•Updated Nov 26, 2024Nov 26, 2024
vtk.js-examples
Public archive
These are a few examples for vtk.js
JavaScript
•24•28•6•0•Updated Nov 7, 2024Nov 7, 2024
HierarchicalGeodesicModeling
Public
Python
•0•1•0•0•Updated Nov 4, 2024Nov 4, 2024
paraview-glance-py
Public
An extended version of ParaView Glance that supports an integrated python server, e.g., for running ITK algorithms...
JavaScript
•
BSD 3-Clause "New" or "Revised" License
•5•6•9•3•Updated Oct 24, 2024Oct 24, 2024
SlicerCBCTToothSegmentation
Public
Slicer extension for automated segmentation of individual teeth in cone-beam CT dental scans using a deep-learning based approach.
segmentation dental 3d-slicer-extension cbct-images
Python
•
Apache License 2.0
•7•16•1•0•Updated Oct 23, 2024Oct 23, 2024
SlicerVirtualReality
Public
A Slicer extension that enables user to interact with a Slicer scene using virtual reality.
cmake openvr vtk 3d-slicer kitware 3d-slicer-extension
C++
•
Apache License 2.0
•58•125•20•4•Updated Sep 26, 2024Sep 26, 2024
ITKHalideFilters
Public
Accelerating ITK Filters with Halide
C++
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Apache License 2.0
•2•3•0•0•Updated Sep 18, 2024Sep 18, 2024