Develop initial report with basic description of the Pharmacy First service and conditions

[milanwiedemann]

This ticket tracks the develop of the report describing the clinical and demographic subgroups accessing the Pharmacy First services over time.

We already implemented the main counts for clinical services and conditions:

• Add counts for Pharmacy First Services and Clinical Conditions #6
  • Clinical services
    • Community Pharmacy (CP) Blood Pressure (BP) Check Service (1659111000000107)
    • Community Pharmacy (CP) Contraception Service (1659121000000101)
    • Community Pharmacist (CP) Consultation Service for minor illness (1577041000000109)
    • Pharmacy First service (983341000000102)
  • Clinical conditions (see codelist)
    • Uncomplicated urinary tract infection (1090711000000102)
    • Acute sinusitis (15805002)
    • Infected insect bite (262550002)
    • Acute otitis media (3110003)
    • Acute pharyngitis (363746003)
    • Herpes zoster (4740000)
    • Impetigo (48277006)

Next, we will add the following breakdowns for both, the clinical services and conditions. To implement these breakdowns you will need make some changes to the measures definition analysis/report_measures.py:

1. Add the new variable, you could look at the Writing a more complex dataset definition tutorial for some examples
2. Add the group_by argument to the measures, see here

We will also need to make changes to the Rmarkdown report 'reports/pharmacy_first_report.Rmd' to add visualisations for each breakdown.

• Add demographic, regional, and clinical breakdowns
  • Add breakdown by age #10
  • Add breakdown by sex #12
  • Add breakdown by ethnicity #15
  • Add breakdown by IMD #13
  • Add breakdown by region #14
  • Add breakdown by medication supply (show % of consultations for Pharmacy First Pathways with/without med supply), waiting on outcomes from the Pharmacy First Data Development project

[milanwiedemann]

@viv3ckj looks like we have done everyting mentioned in this issue so I'm closing it. We will now continuously improve the report, starting with #37 and #41