diff --git a/pairtools/cli/dedup.py b/pairtools/cli/dedup.py index 94a5c64c..5ec4f4c7 100644 --- a/pairtools/cli/dedup.py +++ b/pairtools/cli/dedup.py @@ -113,7 +113,7 @@ @click.option( "--chunksize", type=int, - default=100_000, + default=10_000, show_default=True, help="Number of pairs in each chunk. Reduce for lower memory footprint." " Below 10,000 performance starts suffering significantly and the algorithm might"