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Add a channel for posting issues.
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yjcyxky committed Oct 15, 2023
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8 changes: 4 additions & 4 deletions docs/assets/overrides/main.html
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30 changes: 17 additions & 13 deletions docs/platform.md
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## 🖥️ Open-Source Projects from Our Lab

### A Platform for Drug Repurposing, Disease Mechanism, Toxicological Mechanism and Biomarker Screening
### Knowledge Curation and Databases

<img src="https://raw.githubusercontent.com/yjcyxky/prophetdb.org/master/docs/assets/images/prophet-studio-kg-editor.png" width="100%" />

| Title | Description| Open Source Repo | Feedback |
|--|--|--|--|
| [Prophet Studio](https://prophet-studio.3steps.cn/) | A data labeling and annotation tool for biomedical publications. | [GitHub Repo](https://github.com/yjcyxky/prophet-studio) | [Post an Issue](https://github.com/yjcyxky/prophet-studio/issues) |
| [GuideScoper](https://biosolver.cn/) | Find the Best sgRNAs and Design top-scoring guide RNAs for gene knockout | [GitHub Repo](https://github.com/yjcyxky/cell-guider) ||
| [GlioMarker](http://gliomarker.prophetdb.org/#/home) | An integrated Database for Knowledge Exploration of Diagnostic Biomarkers in Gliomas | [GitHub Repo](https://github.com/yjcyxky/gliomarker) ||

### A Platform for Drug Repurposing, Disease Mechanism, and Biomarker Screening

<img src="https://raw.githubusercontent.com/yjcyxky/prophetdb.org/master/docs/assets/images/biomedgps.png" width="100%" />

Such as Knowledge Graph, Omics Data Analyzer, QC Tools, Data Repo for BioMedical Models, DL Models etc.

|Title | Language | Description|
|--|--|--|
| [BioMedGPS](https://github.com/yjcyxky/biomedgps) | Rust, TypeScript, Python | A knowledge graph system with graph neural network for drug repurposing, disease mechanism and biomarker screening.|
| [Chat Publications](https://github.com/yjcyxky/chat-publications) | Python | Ask questions and get answers from publications.|
|Title | Language | Description| Feedback |
|--|--|--|--|
| [BioMedGPS](https://github.com/yjcyxky/biomedgps) | Rust, TypeScript, Python | A knowledge graph system with graph neural network for drug repurposing, disease mechanism and biomarker screening.| [Post an Issue](https://github.com/yjcyxky/biomedgps/issues) |
| [Chat Publications](https://github.com/yjcyxky/chat-publications) | Python | Ask questions and get answers from publications.| |

### Online Quality Assessment Platform for Multi-omics Data

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| [BioMiner Indexd](https://github.com/yjcyxky/biominer-indexd) | Rust | Index engine for biomedical data files. We epect it will be a indexing engine for indexing high quality data, such as clinical data (EHR), multi-omics data, whole slide image, etc. |
| [PreQC Pack](https://github.com/yjcyxky/preqc-pack) | Rust | A quality assessment tool for high throughput sequence data. |

### Knowledge Curation and Databases

| Title | Description| Open Source Repo |
|--|--|--|
| [Prophet Studio](https://prophet-studio.3steps.cn/) | A data labeling and annotation tool for biomedical publications. | [GitHub Repo](https://github.com/yjcyxky/prophet-studio) |
| [GuideScoper](https://biosolver.cn/) | Find the Best sgRNAs and Design top-scoring guide RNAs for gene knockout | [GitHub Repo](https://github.com/yjcyxky/cell-guider) |
| [GlioMarker](http://gliomarker.prophetdb.org/#/home) | An integrated Database for Knowledge Exploration of Diagnostic Biomarkers in Gliomas | [GitHub Repo](https://github.com/yjcyxky/gliomarker) |

## 📁 Collections

| Title | Description |
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