diff --git a/src/ontology/uberon-edit.obo b/src/ontology/uberon-edit.obo index fdb6393518..6557f93595 100644 --- a/src/ontology/uberon-edit.obo +++ b/src/ontology/uberon-edit.obo @@ -6696,7 +6696,7 @@ synonym: "ramus sinus cavernosi (pars cavernosa) (arteria carotis interna)" EXAC xref: BTO:0002996 xref: FMA:70527 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001532 ! internal carotid artery +intersection_of: connecting_branch_of UBERON:0001532 ! internal carotid artery intersection_of: supplies UBERON:0001675 ! trigeminal ganglion [Term] @@ -15445,7 +15445,7 @@ xref: SCTID:244267000 xref: UMLS:C0226299 {source="ncithesaurus:Gastric_Artery"} xref: Wikipedia:Left_gastric_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001640 ! celiac artery +relationship: connecting_branch_of UBERON:0001640 ! celiac artery relationship: supplies UBERON:0000945 ! stomach property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png" xsd:anyURI @@ -15497,7 +15497,7 @@ xref: Wikipedia:Splenic_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0002106 ! spleen disjoint_from: UBERON:0001640 ! celiac artery -relationship: branching_part_of UBERON:0001640 ! celiac artery +relationship: connecting_branch_of UBERON:0001640 ! celiac artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/a/a2/Gray1188.png" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/268" xsd:anyURI @@ -15516,7 +15516,7 @@ xref: SCTID:244273004 xref: UMLS:C0226319 {source="ncithesaurus:Inferior_Pancreatico-duodenal_artery"} xref: Wikipedia:Inferior_pancreaticoduodenal_artery is_a: UBERON:0009658 ! pancreaticoduodenal artery -relationship: branching_part_of UBERON:0001182 ! superior mesenteric artery +relationship: connecting_branch_of UBERON:0001182 ! superior mesenteric artery relationship: part_of UBERON:0001182 ! superior mesenteric artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/3/3b/Gray533.png" xsd:anyURI @@ -15535,7 +15535,7 @@ xref: SCTID:244276007 xref: UMLS:C0226328 {source="ncithesaurus:Middle_Colic_Artery"} xref: Wikipedia:Middle_colic_artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001182 ! superior mesenteric artery +intersection_of: connecting_branch_of UBERON:0001182 ! superior mesenteric artery intersection_of: supplies UBERON:0001157 ! transverse colon property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/cb/Gray537.png" xsd:anyURI @@ -15554,7 +15554,7 @@ xref: SCTID:244279000 xref: UMLS:C0226323 {source="ncithesaurus:Ileo-colic_Artery"} xref: Wikipedia:Ileocolic_artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001182 ! superior mesenteric artery +intersection_of: connecting_branch_of UBERON:0001182 ! superior mesenteric artery intersection_of: supplies UBERON:0001153 ! caecum intersection_of: supplies UBERON:0001154 ! vermiform appendix intersection_of: supplies UBERON:0002116 ! ileum @@ -15576,7 +15576,7 @@ xref: SCTID:303424001 xref: UMLS:C0580876 {source="ncithesaurus:Superior_Suprarenal_Artery"} xref: Wikipedia:Superior_suprarenal_artery intersection_of: UBERON:0005624 ! suprarenal artery -intersection_of: branching_part_of UBERON:0012255 ! inferior phrenic artery +intersection_of: connecting_branch_of UBERON:0012255 ! inferior phrenic artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png" xsd:anyURI [Term] @@ -18656,7 +18656,7 @@ xref: UMLS:C0226377 {source="ncithesaurus:Inferior_Vesical_Artery"} xref: Wikipedia:Inferior_vesical_artery intersection_of: UBERON:0009027 ! vesical artery intersection_of: supplies UBERON:0006082 ! fundus of urinary bladder -relationship: branching_part_of UBERON:0001309 ! internal iliac artery +relationship: connecting_branch_of UBERON:0001309 ! internal iliac artery relationship: supplies UBERON:0000998 {gci_filler="UBERON:0003101", gci_relation="part_of"} ! seminal vesicle relationship: supplies UBERON:0001000 {gci_filler="UBERON:0003101", gci_relation="part_of"} ! vas deferens relationship: supplies UBERON:0002367 {gci_filler="UBERON:0003101", gci_relation="part_of"} ! prostate gland @@ -18698,7 +18698,7 @@ xref: SCTID:113267002 xref: UMLS:C0226367 {source="ncithesaurus:Iliolumbar_Artery"} xref: Wikipedia:Iliolumbar_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001309 ! internal iliac artery +relationship: connecting_branch_of UBERON:0001309 ! internal iliac artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png" xsd:anyURI [Term] @@ -18715,7 +18715,7 @@ xref: SCTID:244302006 xref: UMLS:C0226369 {source="ncithesaurus:Obturator_Artery"} xref: Wikipedia:Obturator_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001309 ! internal iliac artery +relationship: connecting_branch_of UBERON:0001309 ! internal iliac artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/6f/Gray547.png" xsd:anyURI [Term] @@ -18733,7 +18733,7 @@ xref: SCTID:181354004 xref: UMLS:C0226371 {source="ncithesaurus:Gluteal_Artery"} xref: Wikipedia:Superior_gluteal_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001309 ! internal iliac artery +relationship: connecting_branch_of UBERON:0001309 ! internal iliac artery relationship: supplies UBERON:0001273 ! ilium relationship: supplies UBERON:0001369 ! iliacus muscle relationship: supplies UBERON:0008529 ! piriformis muscle @@ -19271,7 +19271,7 @@ xref: MA:0001946 xref: SCTID:244294001 xref: Wikipedia:Dorsal_artery_of_penis is_a: UBERON:0001637 {source="MA"} ! artery -relationship: branching_part_of UBERON:0007315 {source="FMA"} ! internal pudendal artery +relationship: connecting_branch_of UBERON:0007315 {source="FMA"} ! internal pudendal artery relationship: part_of UBERON:0000989 {source="FMA"} ! penis relationship: part_of UBERON:0008320 {source="BTO"} ! common penile artery relationship: supplies UBERON:0001299 ! glans penis @@ -19636,7 +19636,7 @@ xref: UMLS:C0226401 {source="ncithesaurus:Inferior_Epigastric_Artery"} xref: Wikipedia:Inferior_epigastric_artery intersection_of: UBERON:0006349 ! epigastric artery intersection_of: anastomoses_with UBERON:0007153 ! superior epigastric artery -intersection_of: branching_part_of UBERON:0001308 ! external iliac artery +intersection_of: connecting_branch_of UBERON:0001308 ! external iliac artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/6f/Gray547.png" xsd:anyURI [Term] @@ -19654,7 +19654,7 @@ xref: SCTID:181348000 xref: UMLS:C0226455 {source="ncithesaurus:Deep_Femoral_Artery"} xref: Wikipedia:Deep_femoral_artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0002060 ! femoral artery +intersection_of: connecting_branch_of UBERON:0002060 ! femoral artery intersection_of: part_of UBERON:0035551 ! deep vasculature property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray548.png" xsd:anyURI @@ -19672,7 +19672,7 @@ xref: SCTID:244326008 xref: Wikipedia:Medial_circumflex_femoral_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0007119 ! neck of femur -relationship: branching_part_of UBERON:0001355 {source="FMA"} ! deep femoral artery +relationship: connecting_branch_of UBERON:0001355 {source="FMA"} ! deep femoral artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/c5/Circumflex_femoral_arteries.png" xsd:anyURI [Term] @@ -19716,7 +19716,7 @@ xref: SCTID:244303001 xref: UMLS:C0226394 {source="ncithesaurus:Perineal_Artery"} xref: Wikipedia:Perineal_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0007315 {source="FMA"} ! internal pudendal artery +relationship: connecting_branch_of UBERON:0007315 {source="FMA"} ! internal pudendal artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray542.png" xsd:anyURI [Term] @@ -24252,7 +24252,7 @@ xref: VHOG:0000263 xref: Wikipedia:Vertebral_artery xref: ZFA:0005033 is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001533 ! subclavian artery +relationship: connecting_branch_of UBERON:0001533 ! subclavian artery relationship: supplies UBERON:0002240 ! spinal cord property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/f/ff/Vertebral_artery.png" xsd:anyURI @@ -24325,7 +24325,7 @@ xref: SCTID:181362007 xref: UMLS:C0226492 {source="ncithesaurus:Dorsalis_Pedis_Artery"} xref: Wikipedia:Dorsalis_pedis_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001537 ! anterior tibial artery +relationship: connecting_branch_of UBERON:0001537 ! anterior tibial artery relationship: part_of UBERON:0002103 ! hindlimb relationship: supplies UBERON:0002387 ! pes property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray553.png" xsd:anyURI @@ -24344,7 +24344,7 @@ xref: SCTID:181359009 xref: UMLS:C0226476 {source="ncithesaurus:Peroneal_Artery"} xref: Wikipedia:Peroneal_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001538 ! posterior tibial artery +relationship: connecting_branch_of UBERON:0001538 ! posterior tibial artery relationship: supplies UBERON:0002103 ! hindlimb property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/7/72/Fibular_artery.png" xsd:anyURI @@ -24558,7 +24558,7 @@ xref: FMA:70497 xref: MA:0002583 xref: Wikipedia:Arcuate_arteries_of_the_kidney is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0009885 ! interlobar artery +relationship: connecting_branch_of UBERON:0009885 ! interlobar artery relationship: part_of UBERON:0001225 {source="MA"} ! cortex of kidney property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/87/2610_The_Kidney.jpg" xsd:anyURI @@ -26026,7 +26026,7 @@ xref: UMLS:C0226104 {source="ncithesaurus:Lingual_Artery"} xref: Wikipedia:Lingual_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001723 ! tongue -relationship: branching_part_of UBERON:0001070 {source="AA", source="FMA"} ! external carotid artery +relationship: connecting_branch_of UBERON:0001070 {source="AA", source="FMA"} ! external carotid artery relationship: in_lateral_side_of UBERON:0001723 {source="FMA-abduced-lr"} ! tongue property_value: axiom_lost_from_external_ontology "relationship loss: part_of external carotid (AAO:0010218)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010492", ontology="AAO"} property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/3/3c/Lingual_artery.PNG" xsd:anyURI @@ -26049,7 +26049,7 @@ xref: UMLS:C0226106 {source="ncithesaurus:Sublingual_Artery"} xref: Wikipedia:Sublingual_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001832 ! sublingual gland -relationship: branching_part_of UBERON:0001610 {source="FMA"} ! lingual artery +relationship: connecting_branch_of UBERON:0001610 {source="FMA"} ! lingual artery property_value: axiom_lost_from_external_ontology "relationship loss: part_of external carotid (AAO:0010218)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010491", ontology="AAO"} property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/7/7a/Gray559.png" xsd:anyURI property_value: editor_note "Check grouping with amphibian structure of the same name" xsd:string @@ -26070,7 +26070,7 @@ xref: SCTID:181328007 xref: UMLS:C0226109 {source="ncithesaurus:Facial_Artery"} xref: Wikipedia:Facial_artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001070 ! external carotid artery +intersection_of: connecting_branch_of UBERON:0001070 ! external carotid artery intersection_of: supplies UBERON:0001456 ! face property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png" xsd:anyURI @@ -26088,7 +26088,7 @@ xref: SCTID:244219005 xref: UMLS:C0226117 {source="ncithesaurus:Occipital_Artery"} xref: Wikipedia:Occipital_artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001070 ! external carotid artery +intersection_of: connecting_branch_of UBERON:0001070 ! external carotid artery intersection_of: supplies UBERON:0000403 ! scalp intersection_of: supplies UBERON:0002377 ! muscle of neck property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png" xsd:anyURI @@ -26106,7 +26106,7 @@ xref: MA:0002062 xref: SCTID:181325005 xref: Wikipedia:Superficial_temporal_artery is_a: UBERON:0001632 ! temporal artery -relationship: branching_part_of UBERON:0001070 {source="FMA"} ! external carotid artery +relationship: connecting_branch_of UBERON:0001070 {source="FMA"} ! external carotid artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray1200.png" xsd:anyURI [Term] @@ -26123,7 +26123,7 @@ xref: SCTID:146551008 xref: UMLS:C0226132 {source="ncithesaurus:Transverse_Facial_Artery"} xref: Wikipedia:Transverse_facial_artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001614 ! superficial temporal artery +intersection_of: connecting_branch_of UBERON:0001614 ! superficial temporal artery intersection_of: supplies UBERON:0001597 ! masseter muscle intersection_of: supplies UBERON:0001831 ! parotid gland property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray515.png" xsd:anyURI @@ -26166,7 +26166,7 @@ xref: SCTID:147561008 xref: UMLS:C0226144 {source="ncithesaurus:Mental_Artery"} xref: Wikipedia:Mental_part_of_inferior_alveolar_artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0014693 ! inferior alveolar artery +intersection_of: connecting_branch_of UBERON:0014693 ! inferior alveolar artery intersection_of: supplies UBERON:0008199 ! chin [Term] @@ -26184,7 +26184,7 @@ xref: SCTID:148066005 xref: UMLS:C0226151 {source="ncithesaurus:Buccal_Artery"} xref: Wikipedia:Buccal_artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001616 ! maxillary artery +intersection_of: connecting_branch_of UBERON:0001616 ! maxillary artery intersection_of: supplies UBERON:0001567 ! cheek intersection_of: supplies UBERON:0001582 ! buccinator muscle property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png" xsd:anyURI @@ -26210,7 +26210,7 @@ xref: UMLS:C0029078 {source="ncithesaurus:Opthalmic_Artery"} xref: Wikipedia:Ophthalmic_artery xref: XAO:0000368 is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001532 ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 ! internal carotid artery property_value: axiom_lost_from_external_ontology "relationship loss: part_of internal carotid (AAO:0010219)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010497", ontology="AAO"} property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png" xsd:anyURI property_value: external_definition "Part of internal carotid which carries blood via branches to the eye, the eye muscles, and eyelids.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010497", ontology="AAO", source="AAO:BJB"} @@ -26235,7 +26235,7 @@ xref: SCTID:277771001 xref: UMLS:C0035301 {source="ncithesaurus:Retinal_Artery"} xref: Wikipedia:Central_retinal_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001619 {source="FMA"} ! ophthalmic artery +relationship: connecting_branch_of UBERON:0001619 {source="FMA"} ! ophthalmic artery relationship: develops_from_part_of UBERON:0002270 {notes="proximal portion", source="ISBN:0781772214"} ! hyaloid artery relationship: part_of UBERON:0004864 ! vasculature of retina relationship: supplies UBERON:0000966 ! retina @@ -26284,7 +26284,7 @@ xref: UMLS:C0226171 {source="ncithesaurus:Lacrimal_Artery"} xref: Wikipedia:Lacrimal_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001817 ! lacrimal gland -relationship: branching_part_of UBERON:0001619 {source="FMA"} ! ophthalmic artery +relationship: connecting_branch_of UBERON:0001619 {source="FMA"} ! ophthalmic artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png" xsd:anyURI [Term] @@ -26324,7 +26324,7 @@ xref: UMLS:C0149561 {source="ncithesaurus:Anterior_Cerebral_Artery"} xref: Wikipedia:Anterior_cerebral_artery is_a: UBERON:0004449 ! cerebral artery disjoint_from: UBERON:0001636 {source="lexical"} ! posterior cerebral artery -relationship: branching_part_of UBERON:0001532 {source="FMA", source="WP"} ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 {source="FMA", source="WP"} ! internal carotid artery property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg" xsd:anyURI [Term] @@ -26387,7 +26387,7 @@ xref: SCTID:181312002 xref: UMLS:C0149566 {source="ncithesaurus:Middle_Cerebral_Artery"} xref: Wikipedia:Middle_cerebral_artery is_a: UBERON:0004449 ! cerebral artery -relationship: branching_part_of UBERON:0001532 {source="FMA", source="WP"} ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 {source="FMA", source="WP"} ! internal carotid artery property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg" xsd:anyURI [Term] @@ -26414,10 +26414,10 @@ xref: UMLS:C0149559 {source="ncithesaurus:Posterior_Communicating_Artery"} xref: Wikipedia:Posterior_communicating_artery xref: ZFA:0005001 intersection_of: UBERON:0006347 ! communicating artery -intersection_of: branching_part_of UBERON:0001532 ! internal carotid artery +intersection_of: connecting_branch_of UBERON:0001532 ! internal carotid artery intersection_of: part_of UBERON:0003709 ! circle of Willis disjoint_from: UBERON:0006764 {source="lexical"} ! anterior communicating artery -relationship: branching_part_of UBERON:0001532 {source="FMA", source="ZFA"} ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 {source="FMA", source="ZFA"} ! internal carotid artery relationship: in_lateral_side_of UBERON:0003709 {source="FMA-abduced-lr"} ! circle of Willis property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg" xsd:anyURI property_value: external_definition "An artery that connects caudal division of the internal carotid artery and the basal communicating artery to the basilar artery. Isogai et al. 2001.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0005001", ontology="TAO", source="ZFIN:curator"} @@ -26554,7 +26554,7 @@ xref: VHOG:0000237 xref: Wikipedia:Basilar_artery xref: ZFA:0005002 is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001535 ! vertebral artery +relationship: connecting_branch_of UBERON:0001535 ! vertebral artery relationship: develops_from UBERON:0001535 {source="EHDAA2"} ! vertebral artery relationship: part_of UBERON:0001533 ! subclavian artery relationship: part_of UBERON:0002200 ! vasculature of head @@ -26596,7 +26596,7 @@ xref: SCTID:244214000 xref: UMLS:C0149575 {source="ncithesaurus:Superior_Cerebellar_Artery"} xref: Wikipedia:Superior_cerebellar_artery intersection_of: UBERON:0003472 ! cerebellar artery -intersection_of: branching_part_of UBERON:0001633 ! basilar artery +intersection_of: connecting_branch_of UBERON:0001633 ! basilar artery intersection_of: supplies UBERON:0001895 ! metencephalon intersection_of: supplies UBERON:0001905 ! pineal body intersection_of: supplies UBERON:0002037 ! cerebellum @@ -26619,7 +26619,7 @@ xref: SCTID:181313007 xref: UMLS:C0149576 {source="ncithesaurus:Posterior_Cerebral_Artery"} xref: Wikipedia:Posterior_cerebral_artery intersection_of: UBERON:0004449 ! cerebral artery -intersection_of: branching_part_of UBERON:0001633 ! basilar artery +intersection_of: connecting_branch_of UBERON:0001633 ! basilar artery intersection_of: supplies UBERON:0002021 ! occipital lobe relationship: in_lateral_side_of UBERON:0001633 {source="FMA-abduced-lr"} ! basilar artery property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg" xsd:anyURI @@ -39847,7 +39847,7 @@ xref: SCTID:303426004 xref: UMLS:C0226334 {source="ncithesaurus:Inferior_Suprarenal_Artery"} xref: Wikipedia:Inferior_suprarenal_artery intersection_of: UBERON:0005624 ! suprarenal artery -intersection_of: branching_part_of UBERON:0001184 ! renal artery +intersection_of: connecting_branch_of UBERON:0001184 ! renal artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png" xsd:anyURI [Term] @@ -39943,7 +39943,7 @@ xref: SCTID:244332003 xref: UMLS:C0015801 {source="ncithesaurus:Femoral_Artery"} xref: Wikipedia:Femoral_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001308 {source="FMA", source="WP"} ! external iliac artery +relationship: connecting_branch_of UBERON:0001308 {source="FMA", source="WP"} ! external iliac artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray546.png" xsd:anyURI property_value: external_definition "Artery which supplies blood via branches to the hindlimbs.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010222", ontology="AAO", source="AAO:BJB"} @@ -40638,7 +40638,7 @@ xref: UMLS:C1288338 {source="ncithesaurus:Ductus_Venosus"} xref: VHOG:0000924 xref: Wikipedia:Ductus_venosus is_a: UBERON:0001638 {source="EHDAA2"} ! vein -relationship: branching_part_of UBERON:0005459 {source="cjm"} ! left umbilical vein +relationship: connecting_branch_of UBERON:0005459 {source="cjm"} ! left umbilical vein relationship: develops_from UBERON:0005459 {source="EHDAA2"} ! left umbilical vein relationship: part_of UBERON:0011695 ! embryonic cardiovascular system property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png" xsd:anyURI @@ -45580,7 +45580,7 @@ xref: SCTID:181350008 xref: UMLS:C0032649 {source="ncithesaurus:Popliteal_Artery"} xref: Wikipedia:Popliteal_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0002060 ! femoral artery +relationship: connecting_branch_of UBERON:0002060 ! femoral artery property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/a/a2/Popliteal_artery.png" xsd:anyURI [Term] @@ -51622,7 +51622,7 @@ xref: SCTID:244239009 xref: UMLS:C0226276 {source="ncithesaurus:Internal_Mammary_Artery"} xref: Wikipedia:Internal_thoracic_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001533 ! subclavian artery +relationship: connecting_branch_of UBERON:0001533 ! subclavian artery relationship: part_of UBERON:0001533 ! subclavian artery relationship: supplies UBERON:0000310 ! breast property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray522.png" xsd:anyURI @@ -52634,7 +52634,7 @@ intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0000992 ! ovary intersection_of: supplies UBERON:0000995 ! uterus intersection_of: supplies UBERON:0003974 ! upper part of vagina -relationship: branching_part_of UBERON:0001309 ! internal iliac artery +relationship: connecting_branch_of UBERON:0001309 ! internal iliac artery relationship: contributes_to_morphology_of UBERON:0000995 ! uterus relationship: in_lateral_side_of UBERON:0000995 {source="FMA-abduced-lr"} ! uterus property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/a/ae/Gray1170.png" xsd:anyURI @@ -52900,7 +52900,7 @@ xref: FMA:52312 xref: MA:0002824 xref: SCTID:149380004 is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0018231 ! labyrinthine artery +relationship: connecting_branch_of UBERON:0018231 ! labyrinthine artery relationship: located_in UBERON:0006723 ! cochlear modiolus relationship: part_of UBERON:0001846 ! internal ear @@ -66510,7 +66510,7 @@ xref: Wikipedia:Caudal_artery xref: XAO:0000364 xref: ZFA:0000011 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0005805 ! dorsal aorta +intersection_of: connecting_branch_of UBERON:0005805 ! dorsal aorta intersection_of: part_of UBERON:0007812 ! post-anal tail relationship: part_of UBERON:2001073 ! axial vasculature property_value: external_definition "Extension of the dorsal aorta in the tail. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000011", ontology="TAO", source="ZFIN:curator"} @@ -72230,7 +72230,7 @@ xref: SCTID:65376008 xref: Wikipedia:Ureteral_branches_of_renal_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0000056 ! ureter -relationship: branching_part_of UBERON:0001184 {source="FMA"} ! renal artery +relationship: connecting_branch_of UBERON:0001184 {source="FMA"} ! renal artery relationship: part_of UBERON:0001184 {source="FMA"} ! renal artery [Term] @@ -72257,7 +72257,7 @@ xref: SCTID:145137009 xref: Wikipedia:Superior_labial_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001834 ! upper lip -relationship: branching_part_of UBERON:0001612 {source="FMA"} ! facial artery +relationship: connecting_branch_of UBERON:0001612 {source="FMA"} ! facial artery relationship: part_of UBERON:0000033 ! head [Term] @@ -72276,7 +72276,7 @@ xref: SCTID:145036002 xref: Wikipedia:Inferior_labial_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001835 ! lower lip -relationship: branching_part_of UBERON:0001612 {source="FMA"} ! facial artery +relationship: connecting_branch_of UBERON:0001612 {source="FMA"} ! facial artery relationship: part_of UBERON:0000033 ! head [Term] @@ -89590,8 +89590,8 @@ xref: TAO:0002139 xref: Wikipedia:Afferent_arterioles xref: ZFA:0005307 is_a: UBERON:0001980 ! arteriole -relationship: branching_part_of UBERON:0004723 ! interlobular artery relationship: capable_of GO:0003093 {source="Wikipedia"} ! regulation of glomerular filtration +relationship: connecting_branch_of UBERON:0004723 ! interlobular artery relationship: contributes_to_morphology_of UBERON:0001229 ! renal corpuscle relationship: part_of UBERON:0001229 ! renal corpuscle relationship: supplies UBERON:0001285 ! nephron @@ -89728,7 +89728,7 @@ xref: SCTID:148167004 xref: UMLS:C0226153 {source="ncithesaurus:Infraorbital_Artery"} xref: Wikipedia:Infraorbital_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001616 ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 ! maxillary artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/a/aa/Gray511.png" xsd:anyURI [Term] @@ -97859,8 +97859,7 @@ xref: SCTID:279659005 xref: Wikipedia:Artery_to_the_ductus_deferens intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001000 ! vas deferens -relationship: branching_part_of UBERON:0001310 {source="FMA"} ! umbilical artery -relationship: branching_part_of UBERON:0001312 {source="Wikipedia"} ! superior vesical artery +relationship: connecting_branch_of UBERON:0001312 {source="Wikipedia"} ! superior vesical artery relationship: part_of UBERON:0005352 ! spermatic cord [Term] @@ -97878,7 +97877,7 @@ xref: Wikipedia:Ethmoidal_arteries is_a: UBERON:0001637 {source="MA"} ! artery union_of: UBERON:0012318 ! anterior ethmoidal artery union_of: UBERON:0012319 ! posterior ethmoidal artery -relationship: branching_part_of UBERON:0001619 {source="FMA-abduced"} ! ophthalmic artery +relationship: connecting_branch_of UBERON:0001619 {source="FMA-abduced"} ! ophthalmic artery relationship: part_of UBERON:0000033 ! head [Term] @@ -101629,7 +101628,7 @@ xref: UMLS:C0149603 {source="ncithesaurus:Anterior_Spinal_Artery"} xref: Wikipedia:Anterior_spinal_artery is_a: UBERON:0002458 ! spinal artery disjoint_from: UBERON:0007146 {source="lexical"} ! posterior spinal artery -relationship: branching_part_of UBERON:0001535 ! vertebral artery +relationship: connecting_branch_of UBERON:0001535 ! vertebral artery relationship: develops_from UBERON:0005599 {source="EHDAA2"} ! common dorsal aorta relationship: part_of UBERON:0004571 ! systemic arterial system relationship: supplies UBERON:0002240 ! spinal cord @@ -101722,7 +101721,7 @@ xref: MA:0003094 xref: SCTID:244263001 xref: Wikipedia:Common_hepatic_artery is_a: UBERON:0004573 ! systemic artery -relationship: branching_part_of UBERON:0001640 ! celiac artery +relationship: connecting_branch_of UBERON:0001640 ! celiac artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png" xsd:anyURI [Term] @@ -104119,7 +104118,7 @@ xref: galen:IlealArteries xref: SCTID:265479003 xref: Wikipedia:Ileal_arteries is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001182 ! superior mesenteric artery +relationship: connecting_branch_of UBERON:0001182 ! superior mesenteric artery relationship: part_of UBERON:0001182 ! superior mesenteric artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/8/86/Gray535.png" xsd:anyURI @@ -107745,7 +107744,7 @@ xref: EMAPA:16207 xref: Wikipedia:Vitelline_arteries intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001040 ! yolk sac -relationship: branching_part_of UBERON:0005805 {notes="ventral branch"} ! dorsal aorta +relationship: connecting_branch_of UBERON:0005805 {notes="ventral branch"} ! dorsal aorta property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png" xsd:anyURI [Term] @@ -114242,7 +114241,7 @@ xref: SCTID:244242003 xref: Wikipedia:Musculophrenic_artery is_a: UBERON:0004573 ! systemic artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0002456 ! internal thoracic artery +intersection_of: connecting_branch_of UBERON:0002456 ! internal thoracic artery intersection_of: supplies UBERON:0001103 ! diaphragm [Term] @@ -114823,7 +114822,7 @@ xref: MA:0001993 xref: SCTID:312163002 xref: Wikipedia:Greater_palatine_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001616 ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 ! maxillary artery property_value: editor_note "TODO - check for synonymy between greater and major; branching_part_of relation is made in FMA at level of descending GPA" xsd:string [Term] @@ -115974,9 +115973,9 @@ xref: SCTID:181311009 xref: UMLS:C0149562 {source="ncithesaurus:Anterior_Communicating_Artery"} xref: Wikipedia:Anterior_communicating_artery intersection_of: UBERON:0006347 ! communicating artery -intersection_of: branching_part_of UBERON:0001624 ! anterior cerebral artery +intersection_of: connecting_branch_of UBERON:0001624 ! anterior cerebral artery intersection_of: part_of UBERON:0003709 ! circle of Willis -relationship: branching_part_of UBERON:0001624 {source="FMA"} ! anterior cerebral artery +relationship: connecting_branch_of UBERON:0001624 {source="FMA"} ! anterior cerebral artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg" xsd:anyURI [Term] @@ -119169,7 +119168,7 @@ xref: SCTID:244218002 xref: UMLS:C0226093 {source="ncithesaurus:Superior_Thyroid_Artery"} xref: Wikipedia:Superior_thyroid_artery is_a: UBERON:0003847 ! thyroid artery -relationship: branching_part_of UBERON:0001070 {source="multiple"} ! external carotid artery +relationship: connecting_branch_of UBERON:0001070 {source="multiple"} ! external carotid artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5a/Plate_16_Zuckerkandl.jpg" xsd:anyURI [Term] @@ -119218,7 +119217,7 @@ xref: SCTID:244287004 xref: Wikipedia:Superior_epigastric_artery intersection_of: UBERON:0006349 ! epigastric artery intersection_of: anastomoses_with UBERON:0001354 ! inferior epigastric artery -intersection_of: branching_part_of UBERON:0002456 ! internal thoracic artery +intersection_of: connecting_branch_of UBERON:0002456 ! internal thoracic artery [Term] id: UBERON:0007154 @@ -120967,7 +120966,7 @@ xref: FMA:18835 xref: SCTID:244309002 xref: Wikipedia:Internal_pudendal_artery is_a: UBERON:0007312 ! pudendal artery -relationship: branching_part_of UBERON:0001309 ! internal iliac artery +relationship: connecting_branch_of UBERON:0001309 ! internal iliac artery relationship: in_lateral_side_of UBERON:0006867 {source="FMA-abduced-lr"} ! anal part of perineum relationship: part_of UBERON:0006867 ! anal part of perineum relationship: supplies UBERON:0004176 ! external genitalia @@ -120985,7 +120984,7 @@ xref: SCTID:31708008 xref: Wikipedia:Deep_external_pudendal_artery intersection_of: UBERON:0013137 ! external pudendal artery intersection_of: part_of UBERON:0035551 ! deep vasculature -relationship: branching_part_of UBERON:0002060 {source="FMA"} ! femoral artery +relationship: connecting_branch_of UBERON:0002060 {source="FMA"} ! femoral artery relationship: part_of UBERON:0001308 {source="FMA"} ! external iliac artery relationship: part_of UBERON:0002060 {source="FMA"} ! femoral artery relationship: supplies UBERON:0004176 ! external genitalia @@ -121005,7 +121004,7 @@ xref: SCTID:47954000 xref: Wikipedia:Superficial_external_pudendal_artery intersection_of: UBERON:0013137 ! external pudendal artery intersection_of: part_of UBERON:0035549 ! vasculature of integument -relationship: branching_part_of UBERON:0002060 {source="FMA"} ! femoral artery +relationship: connecting_branch_of UBERON:0002060 {source="FMA"} ! femoral artery relationship: part_of UBERON:0001308 {source="FMA"} ! external iliac artery relationship: supplies UBERON:0004176 ! external genitalia property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray549.png" xsd:anyURI @@ -122015,7 +122014,7 @@ xref: NCIT:C12824 xref: SCTID:181351007 xref: UMLS:C0085427 {source="ncithesaurus:Tibial_Artery"} is_a: UBERON:0001637 {source="MESH"} ! artery -relationship: branching_part_of UBERON:0002250 ! popliteal artery +relationship: connecting_branch_of UBERON:0002250 ! popliteal artery relationship: part_of UBERON:0002103 ! hindlimb [Term] @@ -122816,7 +122815,7 @@ xref: FMA:49828 xref: SCTID:148470005 xref: Wikipedia:Caroticotympanic_arteries is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001532 {source="FMA"} ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 {source="FMA"} ! internal carotid artery relationship: develops_from UBERON:0005608 {source="http://www.ajnr.org/cgi/content/full/21/3/572"} ! hyoid artery [Term] @@ -125334,7 +125333,7 @@ xref: SCTID:293338009 xref: Wikipedia:Bulbourethral_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0013128 ! bulb of penis -relationship: branching_part_of UBERON:0007315 {source="FMA"} ! internal pudendal artery +relationship: connecting_branch_of UBERON:0007315 {source="FMA"} ! internal pudendal artery relationship: part_of UBERON:0000989 {source="Obol"} ! penis relationship: part_of UBERON:0008320 {source="BTO"} ! common penile artery @@ -125369,7 +125368,7 @@ xref: Wikipedia:Deep_artery_of_the_penis intersection_of: UBERON:0001637 ! artery intersection_of: part_of UBERON:0035551 ! deep vasculature intersection_of: supplies UBERON:0004713 ! corpus cavernosum penis -relationship: branching_part_of UBERON:0007315 {source="FMA"} ! internal pudendal artery +relationship: connecting_branch_of UBERON:0007315 {source="FMA"} ! internal pudendal artery relationship: part_of UBERON:0000989 {source="FMA"} ! penis relationship: part_of UBERON:0008320 {source="BTO"} ! common penile artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray543.png" xsd:anyURI @@ -125385,7 +125384,7 @@ xref: Wikipedia:Deep_artery_of_clitoris intersection_of: UBERON:0001637 ! artery intersection_of: part_of UBERON:0035551 ! deep vasculature intersection_of: supplies UBERON:0006608 ! corpus cavernosum clitoridis -relationship: branching_part_of UBERON:0007315 {source="FMA"} ! internal pudendal artery +relationship: connecting_branch_of UBERON:0007315 {source="FMA"} ! internal pudendal artery relationship: part_of UBERON:0002411 {source="FMA"} ! clitoris [Term] @@ -125396,7 +125395,7 @@ xref: FMA:20867 xref: SCTID:244298003 xref: Wikipedia:Dorsal_artery_of_clitoris is_a: UBERON:0001637 {source="MA"} ! artery -relationship: branching_part_of UBERON:0007315 {source="FMA"} ! internal pudendal artery +relationship: connecting_branch_of UBERON:0007315 {source="FMA"} ! internal pudendal artery relationship: part_of UBERON:0002411 {source="FMA"} ! clitoris [Term] @@ -130009,7 +130008,7 @@ xref: UMLS:C0226405 {source="ncithesaurus:Deep_Circumflex_Iliac_Artery"} xref: Wikipedia:Deep_circumflex_iliac_artery intersection_of: UBERON:0009026 ! iliac circumflex artery intersection_of: part_of UBERON:0035551 ! deep vasculature -relationship: branching_part_of UBERON:0001308 {source="FMA"} ! external iliac artery +relationship: connecting_branch_of UBERON:0001308 {source="FMA"} ! external iliac artery relationship: part_of UBERON:0001308 {source="FMA"} ! external iliac artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/07/Gray586.png" xsd:anyURI property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/7/74/Gray586.png" xsd:anyURI @@ -130027,7 +130026,7 @@ xref: UMLS:C0738891 {source="ncithesaurus:Superficial_Circumflex_Iliac_Artery"} xref: Wikipedia:Superficial_circumflex_iliac_artery intersection_of: UBERON:0009026 ! iliac circumflex artery intersection_of: part_of UBERON:0035549 ! vasculature of integument -relationship: branching_part_of UBERON:0002060 {source="FMA"} ! femoral artery +relationship: connecting_branch_of UBERON:0002060 {source="FMA"} ! femoral artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray548.png" xsd:anyURI [Term] @@ -132702,7 +132701,7 @@ xref: MA:0001913 xref: NCIT:C52848 xref: UMLS:C1706783 {source="ncithesaurus:Alveolar_Artery"} is_a: UBERON:0001637 {source="MA"} ! artery -relationship: branching_part_of UBERON:0001616 ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 ! maxillary artery relationship: part_of UBERON:0011595 ! jaw region property_value: editor_note "add child terms" xsd:string @@ -133014,7 +133013,7 @@ xref: UMLS:C0149573 {source="ncithesaurus:Posterior_Inferior_Cerebellar_Artery"} xref: Wikipedia:Posterior_inferior_cerebellar_artery is_a: UBERON:0001637 {source="EHDAA2"} ! artery disjoint_from: UBERON:0009689 {source="lexical"} ! anterior inferior cerebellar artery -relationship: branching_part_of UBERON:0001535 {source="FMA"} ! vertebral artery +relationship: connecting_branch_of UBERON:0001535 {source="FMA"} ! vertebral artery relationship: develops_from UBERON:0001535 {source="EHDAA2"} ! vertebral artery relationship: part_of UBERON:0001535 {source="FMA"} ! vertebral artery @@ -133030,7 +133029,7 @@ xref: SCTID:244213006 xref: UMLS:C0226245 {source="ncithesaurus:Anterior_Inferior_Cerebellar_Artery"} xref: Wikipedia:Anterior_inferior_cerebellar_artery is_a: UBERON:0003472 ! cerebellar artery -relationship: branching_part_of UBERON:0001633 {source="FMA"} ! basilar artery +relationship: connecting_branch_of UBERON:0001633 {source="FMA"} ! basilar artery relationship: develops_from UBERON:0001532 {source="EHDAA2"} ! internal carotid artery [Term] @@ -136323,7 +136322,7 @@ xref: galen:GastroduodenalArtery xref: SCTID:244269002 xref: Wikipedia:Gastroduodenal_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0005436 {source="FMA"} ! common hepatic artery +relationship: connecting_branch_of UBERON:0005436 {source="FMA"} ! common hepatic artery relationship: develops_from UBERON:0005436 {source="EHDAA2"} ! common hepatic artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png" xsd:anyURI @@ -137594,7 +137593,7 @@ xref: FMA:49711 xref: SCTID:278100005 xref: Wikipedia:Middle_meningeal_artery is_a: UBERON:0003474 ! meningeal artery -relationship: branching_part_of UBERON:0001616 {source="FMA"} ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 {source="FMA"} ! maxillary artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/1/1e/Middle_meningeal_artery.png" xsd:anyURI [Term] @@ -137615,7 +137614,7 @@ xref: SCTID:369327009 xref: UMLS:C0226187 {source="ncithesaurus:Anterior_Meningeal_Artery"} xref: Wikipedia:Anterior_ethmoidal_artery#Branches is_a: UBERON:0003474 ! meningeal artery -relationship: branching_part_of UBERON:0012318 {source="Wikipedia"} ! anterior ethmoidal artery +relationship: connecting_branch_of UBERON:0012318 {source="Wikipedia"} ! anterior ethmoidal artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png" xsd:anyURI property_value: editor_note "this needs checking as part of a general revision of the blood vessels and their branches - unclear if the anterior meningeal artery should be treated separately from the anterior ethmoidal artery (ie as a branch) or the same thing" xsd:string @@ -139135,7 +139134,7 @@ xref: UMLS:C1710159 {source="ncithesaurus:Splenic_Trabecular_Artery"} xref: Wikipedia:Trabecular_arteries intersection_of: UBERON:0001637 ! artery intersection_of: part_of UBERON:0001265 ! trabecula of spleen -relationship: branching_part_of UBERON:0001194 {source="MP"} ! splenic artery +relationship: connecting_branch_of UBERON:0001194 {source="MP"} ! splenic artery relationship: contributes_to_morphology_of UBERON:0002106 ! spleen property_value: external_definition "When the splenic artery passes into the trabecula of the spleen and branches, they become known as the trabecular arteries. When these arteries then reach the white pulp, and become covered with Periarteriolar lymphoid sheaths, the name changes again to central arteries (or central arterioles). Branches of the central arteries are given to the red pulp, and these are called penicillar arteries).[Wikipedia]" xsd:string {ontology="Wikipedia", source="Wikipedia:Trabecular_arteries"} @@ -139165,8 +139164,8 @@ synonym: "splenic arteriole" BROAD [] synonym: "splenic central arteriole" EXACT [MP:0002361] xref: MA:0000763 is_a: UBERON:0001980 ! arteriole -relationship: branching_part_of UBERON:0010399 {source="Wikipedia:Trabecular_arteries"} ! spleen trabecular artery relationship: connected_to UBERON:0010400 ! spleen trabecular vein +relationship: connecting_branch_of UBERON:0010399 {source="Wikipedia:Trabecular_arteries"} ! spleen trabecular artery relationship: contributes_to_morphology_of UBERON:0001959 ! white pulp of spleen relationship: part_of UBERON:0001959 ! white pulp of spleen @@ -139242,7 +139241,7 @@ xref: NCIT:C32076 xref: SCTID:145238006 xref: UMLS:C0226116 {source="ncithesaurus:Angular_Artery"} is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001612 ! facial artery +relationship: connecting_branch_of UBERON:0001612 ! facial artery [Term] id: UBERON:0010409 @@ -147971,7 +147970,7 @@ synonym: "extraembryonic umbilical artery" EXACT [VHOG:0001157] xref: VHOG:0001157 is_a: UBERON:0000478 {source="EHDAA2-abduced"} ! extraembryonic structure is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001309 {source="FMA"} ! internal iliac artery +relationship: connecting_branch_of UBERON:0001309 {source="FMA"} ! internal iliac artery relationship: part_of UBERON:0001310 ! umbilical artery relationship: part_of UBERON:0007807 {source="EHDAA2-abduced"} ! connecting stalk vasculature @@ -152317,7 +152316,7 @@ xref: SCTID:244223002 xref: Wikipedia:Deep_cervical_artery intersection_of: UBERON:0012320 ! cervical artery intersection_of: part_of UBERON:0035551 ! deep vasculature -relationship: branching_part_of UBERON:0004688 {source="FMA"} ! costo-cervical trunk +relationship: connecting_branch_of UBERON:0004688 {source="FMA"} ! costo-cervical trunk relationship: part_of UBERON:0000974 ! neck [Term] @@ -152329,7 +152328,7 @@ xref: FMA:52489 xref: SCTID:161846001 xref: Wikipedia:Ascending_cervical_artery is_a: UBERON:0012320 ! cervical artery -relationship: branching_part_of UBERON:0007149 {source="FMA", source="Wikipedia"} ! inferior thyroid artery +relationship: connecting_branch_of UBERON:0007149 {source="FMA", source="Wikipedia"} ! inferior thyroid artery [Term] id: UBERON:0012324 @@ -154223,7 +154222,7 @@ synonym: "penicilli" EXACT OMO:0003004 [http://www.merriam-webster.com/medical/p synonym: "penicillus" EXACT [FMA:16038] xref: FMA:16038 is_a: UBERON:0001980 ! arteriole -relationship: branching_part_of UBERON:0010401 {source="Wikipedia:Trabecular_arteries"} ! spleen central arteriole +relationship: connecting_branch_of UBERON:0010401 {source="Wikipedia:Trabecular_arteries"} ! spleen central arteriole relationship: part_of UBERON:0001959 {source="FMA"} ! white pulp of spleen relationship: supplies UBERON:0001250 {source="Wikipedia:Trabecular_arteries"} ! red pulp of spleen @@ -157654,7 +157653,7 @@ xref: UMLS:C0226149 {source="ncithesaurus:Masseteric_Artery"} xref: Wikipedia:Masseteric_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001597 ! masseter muscle -relationship: branching_part_of UBERON:0001616 {source="FMA"} ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 {source="FMA"} ! maxillary artery [Term] id: UBERON:0013649 @@ -162060,7 +162059,7 @@ name: inferior alveolar artery xref: FMA:49695 xref: SCTID:276151008 is_a: UBERON:0009654 ! alveolar artery -relationship: branching_part_of UBERON:0001616 {source="FMA"} ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 {source="FMA"} ! maxillary artery [Term] id: UBERON:0014694 @@ -162070,7 +162069,7 @@ xref: FMA:49624 xref: SCTID:244220004 xref: Wikipedia:Posterior_auricular_artery is_a: UBERON:0009655 ! auricular artery -relationship: branching_part_of UBERON:0001070 {source="FMA"} ! external carotid artery +relationship: connecting_branch_of UBERON:0001070 {source="FMA"} ! external carotid artery relationship: supplies UBERON:0001757 ! pinna [Term] @@ -162082,7 +162081,7 @@ xref: SCTID:147157007 xref: Wikipedia:Deep_auricular_artery intersection_of: UBERON:0009655 ! auricular artery intersection_of: part_of UBERON:0035551 ! deep vasculature -relationship: branching_part_of UBERON:0001616 {source="FMA"} ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 {source="FMA"} ! maxillary artery relationship: supplies UBERON:0010069 ! outer epithelial layer of tympanic membrane [Term] @@ -162096,7 +162095,7 @@ xref: SCTID:244211008 xref: Wikipedia:Anterior_choroidal_artery is_a: UBERON:0013151 ! choroidal artery disjoint_from: UBERON:0014697 {source="lexical"} ! posterior choroidal artery -relationship: branching_part_of UBERON:0001532 {source="FMA"} ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 {source="FMA"} ! internal carotid artery [Term] id: UBERON:0014697 @@ -162105,7 +162104,7 @@ xref: FMA:50657 xref: NCIT:C33352 xref: SCTID:369342007 is_a: UBERON:0013151 ! choroidal artery -relationship: branching_part_of UBERON:0001636 {source="FMA"} ! posterior cerebral artery +relationship: connecting_branch_of UBERON:0001636 {source="FMA"} ! posterior cerebral artery relationship: part_of UBERON:0001636 {source="FMA"} ! posterior cerebral artery [Term] @@ -162749,7 +162748,7 @@ xref: SCTID:369323008 xref: Wikipedia:Lateral_palpebral_arteries is_a: UBERON:0014770 ! palpebral artery disjoint_from: UBERON:0014773 {source="lexical"} ! medial palpebral artery -relationship: branching_part_of UBERON:0001622 {source="FMA"} ! lacrimal artery +relationship: connecting_branch_of UBERON:0001622 {source="FMA"} ! lacrimal artery [Term] id: UBERON:0014773 @@ -162765,7 +162764,7 @@ xref: FMA:50012 xref: SCTID:369331003 xref: Wikipedia:Medial_palpebral_arteries is_a: UBERON:0014770 ! palpebral artery -relationship: branching_part_of UBERON:0001619 {source="FMA"} ! ophthalmic artery +relationship: connecting_branch_of UBERON:0001619 {source="FMA"} ! ophthalmic artery [Term] id: UBERON:0014775 @@ -165434,7 +165433,7 @@ name: terminal branch of ophthalmic artery def: "The two terminal branches of the ophthalmic artery in humans are the dorsal nasal artery and the supratrochlear artery." [Wikipedia:Dorsal_nasal_artery, Wikipedia:Supratrochlear_artery] xref: FMA:51956 is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001619 ! ophthalmic artery +relationship: connecting_branch_of UBERON:0001619 ! ophthalmic artery [Term] id: UBERON:0015157 @@ -165446,7 +165445,7 @@ xref: FMA:49663 xref: SCTID:146753008 xref: Wikipedia:Zygomatico-orbital_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001614 {source="FMA"} ! superficial temporal artery +relationship: connecting_branch_of UBERON:0001614 {source="FMA"} ! superficial temporal artery [Term] id: UBERON:0015158 @@ -165454,7 +165453,7 @@ name: ophthalmotemporal branch of external ophthalmic artery comment: The blood supply to the (Harderian) gland has been reported in greatest detail in the sparrow Passer domesticus (Slonaker, 1918), where it is derived through the ophthalmotemporal branch of the external ophthalmic artery http://www.ncbi.nlm.nih.gov/pubmed/7559104 synonym: "ophthalmotemporal artery" RELATED [] is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001619 ! ophthalmic artery +relationship: connecting_branch_of UBERON:0001619 ! ophthalmic artery relationship: supplies UBERON:0004187 {source="PMID:7559104"} ! Harderian gland [Term] @@ -165469,7 +165468,7 @@ xref: FMA:49973 xref: SCTID:369330002 xref: Wikipedia:Supraorbital_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001619 ! ophthalmic artery +relationship: connecting_branch_of UBERON:0001619 ! ophthalmic artery relationship: supplies UBERON:0001604 ! levator palpebrae superioris relationship: supplies UBERON:0001760 ! frontal sinus @@ -165602,7 +165601,7 @@ synonym: "spiral artery" RELATED INCONSISTENT [Wikipedia:Helicine_branches_of_ut xref: FMA:21101 xref: Wikipedia:Helicine_branches_of_uterine_artery intersection_of: UBERON:0015177 ! helicine artery -intersection_of: branching_part_of UBERON:0002493 ! uterine artery +intersection_of: connecting_branch_of UBERON:0002493 ! uterine artery relationship: part_of UBERON:0001296 ! myometrium [Term] @@ -166324,7 +166323,7 @@ xref: MA:0003095 xref: SCTID:244262006 xref: Wikipedia:Hepatic_artery_proper is_a: UBERON:0001193 {source="MA"} ! hepatic artery -relationship: branching_part_of UBERON:0005436 {source="FMA"} ! common hepatic artery +relationship: connecting_branch_of UBERON:0005436 {source="FMA"} ! common hepatic artery [Term] id: UBERON:0015481 @@ -170132,7 +170131,7 @@ id: UBERON:0017616 name: afferent spiracular artery def: "A section of a pharyngeal arch artery that carries blood away from the spiracle." [ISBN:0073040584] intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0003118 ! pharyngeal arch artery 1 +intersection_of: connecting_branch_of UBERON:0003118 ! pharyngeal arch artery 1 intersection_of: supplies UBERON:0010019 ! spiracle (sensu Vertebrata) [Term] @@ -170140,7 +170139,7 @@ id: UBERON:0017617 name: efferent spiracular artery def: "A section of a pharyngeal arch artery that drains the spiracle." [ISBN:0073040584] intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0003118 ! pharyngeal arch artery 1 +intersection_of: connecting_branch_of UBERON:0003118 ! pharyngeal arch artery 1 intersection_of: drains UBERON:0010019 ! spiracle (sensu Vertebrata) [Term] @@ -171186,8 +171185,8 @@ xref: NCIT:C32834 xref: SCTID:148672009 xref: Wikipedia:Labyrinthine_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001633 {gci_relation="part_of", gci_filler="NCBITaxon:9606", cases="15%", source="WP"} ! basilar artery relationship: branching_part_of UBERON:0009689 {gci_relation="part_of", gci_filler="NCBITaxon:9606", cases="85-100%", source="WP"} ! anterior inferior cerebellar artery +relationship: connecting_branch_of UBERON:0001633 {gci_relation="part_of", gci_filler="NCBITaxon:9606", cases="15%", source="WP"} ! basilar artery relationship: part_of UBERON:0001846 ! internal ear [Term] @@ -171347,7 +171346,7 @@ xref: SCTID:76543001 xref: Wikipedia:Thymic_branches_of_internal_thoracic_artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0002370 ! thymus -relationship: branching_part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery +relationship: connecting_branch_of UBERON:0002456 {source="FMA"} ! internal thoracic artery [Term] id: UBERON:0018244 @@ -171395,7 +171394,7 @@ relationship: supplies UBERON:0018244 ! superficial cervical thymus id: UBERON:0018250 name: middle thyroid artery is_a: UBERON:0003847 ! thyroid artery -relationship: branching_part_of UBERON:0001070 {source="PMC1167197"} ! external carotid artery +relationship: connecting_branch_of UBERON:0001070 {source="PMC1167197"} ! external carotid artery property_value: taxon_notes "In Cavio cobaya, arises from the external carotid or distal half of the common carotid artery, passed the thyroid gland cranially or penetrated it to terminate in the inferior laryngeal artery" xsd:string [Term] @@ -171452,7 +171451,7 @@ xref: FMA:14808 xref: SCTID:265391008 xref: Wikipedia:Jejunal_arteries intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001182 ! superior mesenteric artery +intersection_of: connecting_branch_of UBERON:0001182 ! superior mesenteric artery intersection_of: supplies UBERON:0002115 ! jejunum [Term] @@ -172624,7 +172623,7 @@ synonym: "superior posterior alveolar artery" EXACT [FMA:49757] xref: FMA:49757 xref: Wikipedia:Posterior_superior_alveolar_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001616 {source="FMA"} ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 {source="FMA"} ! maxillary artery [Term] id: UBERON:0018398 @@ -180012,7 +180011,7 @@ xref: FMA:70192 xref: SCTID:279658002 xref: Wikipedia:Cremasteric_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001354 {source="FMA"} ! inferior epigastric artery +relationship: connecting_branch_of UBERON:0001354 {source="FMA"} ! inferior epigastric artery relationship: part_of UBERON:0001354 {source="FMA"} ! inferior epigastric artery [Term] @@ -180305,7 +180304,7 @@ xref: SCTID:293541004 xref: Wikipedia:Artery_of_bulb_of_vestibule intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0013129 ! bulb of vestibule -relationship: branching_part_of UBERON:0007315 {source="FMA"} ! internal pudendal artery +relationship: connecting_branch_of UBERON:0007315 {source="FMA"} ! internal pudendal artery [Term] id: UBERON:0034728 @@ -181513,7 +181512,7 @@ xref: FMA:44594 xref: SCTID:244331005 xref: Wikipedia:Arcuate_artery_of_the_foot is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001537 {source="FMA"} ! anterior tibial artery +relationship: connecting_branch_of UBERON:0001537 {source="FMA"} ! anterior tibial artery relationship: part_of UBERON:0002387 ! pes [Term] @@ -181850,7 +181849,7 @@ xref: SCTID:368079006 xref: Wikipedia:Superficial_epigastric_artery intersection_of: UBERON:0006349 ! epigastric artery intersection_of: anastomoses_with UBERON:0001354 ! inferior epigastric artery -intersection_of: branching_part_of UBERON:0002060 ! femoral artery +intersection_of: connecting_branch_of UBERON:0002060 ! femoral artery relationship: part_of UBERON:0001308 {source="FMA"} ! external iliac artery [Term] @@ -182403,7 +182402,7 @@ xref: NCIT:C33677 xref: SCTID:244278008 xref: Wikipedia:Superior_rectal_artery is_a: UBERON:0035039 ! rectal artery -relationship: branching_part_of UBERON:0001183 {source="FMA"} ! inferior mesenteric artery +relationship: connecting_branch_of UBERON:0001183 {source="FMA"} ! inferior mesenteric artery relationship: part_of UBERON:0001183 {source="FMA"} ! inferior mesenteric artery [Term] @@ -182420,7 +182419,7 @@ xref: SCTID:147965009 xref: Wikipedia:Deep_temporal_arteries intersection_of: UBERON:0001632 ! temporal artery intersection_of: part_of UBERON:0035551 ! deep vasculature -relationship: branching_part_of UBERON:0001616 {source="FMA"} ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 {source="FMA"} ! maxillary artery [Term] id: UBERON:0035042 @@ -182431,7 +182430,7 @@ xref: FMA:49666 xref: SCTID:146854006 xref: Wikipedia:Middle_temporal_artery is_a: UBERON:0001632 ! temporal artery -relationship: branching_part_of UBERON:0001614 {source="FMA"} ! superficial temporal artery +relationship: connecting_branch_of UBERON:0001614 {source="FMA"} ! superficial temporal artery [Term] id: UBERON:0035043 @@ -183374,7 +183373,7 @@ xref: SCTID:265956005 xref: UMLS:C0226330 xref: Wikipedia:Sigmoid_arteries is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001183 {source="FMA"} ! inferior mesenteric artery +relationship: connecting_branch_of UBERON:0001183 {source="FMA"} ! inferior mesenteric artery [Term] id: UBERON:0035183 @@ -183531,7 +183530,7 @@ xref: SCTID:44894007 xref: UMLS:C0226227 is_a: UBERON:0001637 ! artery disjoint_from: UBERON:0035462 {source="lexical"} ! anterior parietal artery -relationship: branching_part_of UBERON:0001627 {source="FMA"} ! middle cerebral artery +relationship: connecting_branch_of UBERON:0001627 {source="FMA"} ! middle cerebral artery [Term] id: UBERON:0035225 @@ -183543,7 +183542,7 @@ xref: SCTID:44310009 xref: UMLS:C0226228 is_a: UBERON:0001632 {source="FMA"} ! temporal artery disjoint_from: UBERON:0035261 {source="lexical"} ! posterior temporal artery -relationship: branching_part_of UBERON:0001627 {source="FMA"} ! middle cerebral artery +relationship: connecting_branch_of UBERON:0001627 {source="FMA"} ! middle cerebral artery [Term] id: UBERON:0035228 @@ -183594,7 +183593,7 @@ xref: NCIT:C32837 xref: SCTID:360629008 xref: UMLS:C1182571 intersection_of: UBERON:0005396 ! carotid artery segment -intersection_of: branching_part_of UBERON:0001532 ! internal carotid artery +intersection_of: connecting_branch_of UBERON:0001532 ! internal carotid artery [Term] id: UBERON:0035240 @@ -183679,7 +183678,7 @@ xref: NCIT:C33384 xref: SCTID:23830002 xref: UMLS:C0226229 is_a: UBERON:0001632 {source="FMA"} ! temporal artery -relationship: branching_part_of UBERON:0001627 {source="FMA"} ! middle cerebral artery +relationship: connecting_branch_of UBERON:0001627 {source="FMA"} ! middle cerebral artery [Term] id: UBERON:0035267 @@ -183721,8 +183720,7 @@ xref: SCTID:198713000 xref: UMLS:C0226419 xref: Wikipedia:Superior_thoracic_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001394 {source="FMA"} ! axillary artery -relationship: branching_part_of UBERON:0001533 {source="FMA"} ! subclavian artery +relationship: connecting_branch_of UBERON:0001394 {source="FMA"} ! axillary artery [Term] id: UBERON:0035276 @@ -183789,7 +183787,7 @@ xref: NCIT:C33385 xref: SCTID:314363005 xref: UMLS:C1181956 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001538 ! posterior tibial artery +intersection_of: connecting_branch_of UBERON:0001538 ! posterior tibial artery [Term] id: UBERON:0035295 @@ -183823,7 +183821,7 @@ xref: NCIT:C33826 xref: SCTID:360551008 xref: UMLS:C0816071 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001406 ! ulnar artery +intersection_of: connecting_branch_of UBERON:0001406 ! ulnar artery [Term] id: UBERON:0035307 @@ -183834,7 +183832,7 @@ xref: NCIT:C33867 xref: SCTID:360535000 xref: UMLS:C1185372 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001535 ! vertebral artery +intersection_of: connecting_branch_of UBERON:0001535 ! vertebral artery [Term] id: UBERON:0035310 @@ -183967,7 +183965,7 @@ xref: NCIT:C33114 xref: SCTID:314302003 xref: UMLS:C0923405 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001627 ! middle cerebral artery +intersection_of: connecting_branch_of UBERON:0001627 ! middle cerebral artery [Term] id: UBERON:0035359 @@ -183978,7 +183976,7 @@ xref: NCIT:C32227 xref: SCTID:360543005 xref: UMLS:C0815997 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001398 ! brachial artery +intersection_of: connecting_branch_of UBERON:0001398 ! brachial artery [Term] id: UBERON:0035365 @@ -184056,7 +184054,7 @@ xref: NCIT:C32082 xref: SCTID:314304002 xref: UMLS:C0923371 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001624 ! anterior cerebral artery +intersection_of: connecting_branch_of UBERON:0001624 ! anterior cerebral artery disjoint_from: UBERON:0035508 {source="lexical"} ! branch of posterior cerebral artery [Term] @@ -184105,7 +184103,7 @@ xref: NCIT:C32958 xref: SCTID:244248004 xref: UMLS:C0447055 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001626 ! left coronary artery +intersection_of: connecting_branch_of UBERON:0001626 ! left coronary artery [Term] id: UBERON:0035398 @@ -184117,7 +184115,7 @@ xref: NCIT:C32552 xref: SCTID:244216003 xref: UMLS:C0447038 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001070 ! external carotid artery +intersection_of: connecting_branch_of UBERON:0001070 ! external carotid artery [Term] id: UBERON:0035401 @@ -184149,7 +184147,7 @@ xref: SCTID:303427008 xref: UMLS:C1261387 xref: Wikipedia:Superior_hypophysial_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001532 ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 ! internal carotid artery relationship: supplies UBERON:0000007 ! pituitary gland [Term] @@ -184201,7 +184199,7 @@ xref: SCTID:362036002 xref: UMLS:C0226037 xref: Wikipedia:Circumflex_branch_of_left_coronary_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001626 {source="FMA"} ! left coronary artery +relationship: connecting_branch_of UBERON:0001626 {source="FMA"} ! left coronary artery relationship: part_of UBERON:0001626 {source="FMA"} ! left coronary artery [Term] @@ -184339,7 +184337,7 @@ xref: NCIT:C32101 xref: SCTID:78499006 xref: UMLS:C0226226 is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001627 {source="FMA"} ! middle cerebral artery +relationship: connecting_branch_of UBERON:0001627 {source="FMA"} ! middle cerebral artery [Term] id: UBERON:0035465 @@ -184444,7 +184442,7 @@ xref: NCIT:C32195 xref: SCTID:360537008 xref: UMLS:C1185381 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001633 ! basilar artery +intersection_of: connecting_branch_of UBERON:0001633 ! basilar artery [Term] id: UBERON:0035492 @@ -184457,7 +184455,7 @@ xref: SCTID:303428003 xref: UMLS:C1261083 xref: Wikipedia:Inferior_hypophysial_artery is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001532 ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 ! internal carotid artery relationship: supplies UBERON:0000007 ! pituitary gland [Term] @@ -184522,7 +184520,7 @@ xref: NCIT:C33351 xref: SCTID:314305001 xref: UMLS:C0923792 intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001636 ! posterior cerebral artery +intersection_of: connecting_branch_of UBERON:0001636 ! posterior cerebral artery [Term] id: UBERON:0035514 @@ -186005,7 +186003,7 @@ xref: FMA:14781 xref: SCTID:244271002 xref: Wikipedia:Right_gastro-omental_artery is_a: UBERON:0009025 ! gastroepiploic artery -relationship: branching_part_of UBERON:0010132 {source="FMA"} ! gastroduodenal artery +relationship: connecting_branch_of UBERON:0010132 {source="FMA"} ! gastroduodenal artery relationship: supplies UBERON:0002108 {source="FMA"} ! small intestine [Term] @@ -186025,7 +186023,7 @@ xref: FMA:14796 xref: SCTID:244270001 xref: Wikipedia:Left_gastro-omental_artery is_a: UBERON:0009025 ! gastroepiploic artery -relationship: branching_part_of UBERON:0001194 {source="FMA"} ! splenic artery +relationship: connecting_branch_of UBERON:0001194 {source="FMA"} ! splenic artery [Term] id: UBERON:0035831 @@ -189843,7 +189841,7 @@ def: "An artery that commonly arises from the terminal branch of the ileocolic a synonym: "appendiceal artery" EXACT [FMA:14818] xref: FMA:14818 is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001197 ! ileocolic artery +relationship: connecting_branch_of UBERON:0001197 ! ileocolic artery relationship: supplies UBERON:0001154 {source="FMA"} ! vermiform appendix [Term] @@ -189918,7 +189916,7 @@ name: pancreatic artery xref: FMA:70471 intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001264 ! pancreas -relationship: branching_part_of UBERON:0001194 ! splenic artery +relationship: connecting_branch_of UBERON:0001194 ! splenic artery [Term] id: UBERON:0039262 @@ -189966,7 +189964,7 @@ name: posterior labial artery synonym: "posterior labial branch of internal pudendal artery" EXACT [FMA:20886] xref: FMA:20886 is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001358 {source="FMA"} ! perineal artery +relationship: connecting_branch_of UBERON:0001358 {source="FMA"} ! perineal artery [Term] id: UBERON:0039355 @@ -222145,7 +222143,7 @@ name: left colic artery def: "The first branch of the inferior mesenteric artery (IMA) is the left colic artery. The left colic artery supplies blood flow to the distal third of the transverse colon and the entirety of the descending colon. Once diverging from the IMA, the left colic artery runs anterior to the left ureter, left internal spermatic vessels (males), and psoas major before branching into its ascending and descending segments." [https://orcid.org/0000-0003-4183-8865, PMID:29489246] xref: FMA:14826 is_a: UBERON:0001637 ! artery -relationship: branching_part_of UBERON:0001183 ! inferior mesenteric artery +relationship: connecting_branch_of UBERON:0001183 ! inferior mesenteric artery relationship: dc-contributor https://orcid.org/0000-0002-2825-0621 ! Paola Roncaglia relationship: supplies UBERON:0001157 ! transverse colon relationship: supplies UBERON:0001158 ! descending colon @@ -222281,7 +222279,7 @@ def: "An arteriole that arises from the hilar artery of a lymph node and radiate synonym: "arteriole of medulla of lymph node" EXACT [] intersection_of: UBERON:0001980 ! arteriole intersection_of: part_of UBERON:0002007 ! medulla of lymph node -relationship: branching_part_of UBERON:8410034 ! lymph node artery +relationship: connecting_branch_of UBERON:8410034 ! lymph node artery relationship: dc-contributor https://orcid.org/0000-0002-2825-0621 ! Paola Roncaglia [Term] @@ -224762,6 +224760,11 @@ id: connected_to name: connected to xref: RO:0002170 +[Typedef] +id: connecting_branch_of +name: connecting branch of +xref: RO:0002252 + [Typedef] id: connects name: connects diff --git a/src/patterns/data/default/vessel_connecting_branch_of_vessel_pattern.tsv b/src/patterns/data/default/vessel_connecting_branch_of_vessel_pattern.tsv new file mode 100644 index 0000000000..a6ada87ada --- /dev/null +++ b/src/patterns/data/default/vessel_connecting_branch_of_vessel_pattern.tsv @@ -0,0 +1,4 @@ +defined_class defined_class_label stem_vessel stem_vessel_label +UBERON:0001394 axillary artery UBERON:0001394 subclavian artery +UBERON:0001312 superior vesical artery UBERON:0001310 umbilical artery +UBERON:0013137 external pudendal artery UBERON:0002060 femoral artery \ No newline at end of file diff --git a/src/patterns/definitions.owl b/src/patterns/definitions.owl index de8a2ae092..569d14ddca 100644 --- a/src/patterns/definitions.owl +++ b/src/patterns/definitions.owl @@ -7,11 +7,16 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2023-07-24") + +Annotation(owl:versionInfo "2023-11-21") +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -92,6 +97,7 @@ Declaration(Class()) Declaration(Class()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) +Declaration(ObjectProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) @@ -106,6 +112,18 @@ Declaration(AnnotationProperty( () + +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: () + +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: () + +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (right upper third secondary molar tooth) AnnotationAssertion( "A upper third secondary molar tooth that is in the right side of the upper jaw region.") diff --git a/src/patterns/dosdp-patterns/vessel_connecting_branch_of_vessel_pattern.yaml b/src/patterns/dosdp-patterns/vessel_connecting_branch_of_vessel_pattern.yaml new file mode 100644 index 0000000000..b0fb587a61 --- /dev/null +++ b/src/patterns/dosdp-patterns/vessel_connecting_branch_of_vessel_pattern.yaml @@ -0,0 +1,22 @@ +pattern_name: vessel_connecting_branch_of_vessel_pattern +pattern_iri: http://purl.obolibrary.org/obo/uberon/src/patterns/vessel_connecting_branch_of_vessel_pattern.yaml + +description: A vessel that is branching from another vessel (stem vessel), and it is NOT part of it, it is a 'connecting branch of' the stem vessel. +#examples: vertebral artery(UBERON:0001535) is a connecting branch of subclavian artery(UBERON:0001533) + +contributors: + - https://orcid.org/0000-0001-6677-8489 + +classes: + vessel: "UBERON:0000055" + +relations: + connecting_branch_of: "RO:0002252" + +vars: + stem_vessel: "'vessel'" + +subClassOf: + text: "'connecting_branch_of' some %s" + vars: + - stem_vessel diff --git a/src/patterns/pattern.owl b/src/patterns/pattern.owl index 8c747089fe..2c0cc6dd95 100644 --- a/src/patterns/pattern.owl +++ b/src/patterns/pattern.owl @@ -8,6 +8,7 @@ Prefix(rdfs:=) Ontology( +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15,29 +16,32 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(ObjectProperty()) +Declaration(ObjectProperty()) Declaration(ObjectProperty()) -Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) +Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(AnnotationProperty()) -Declaration(AnnotationProperty()) -Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) @@ -61,6 +65,17 @@ AnnotationAssertion( "'anatomical entity' of 'anatomical entity'"^^xsd:string) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (xsd:string calcareous tooth) + +AnnotationAssertion( "A calcareous tooth that is in the left side of the jaw region."^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "left_teeth"^^xsd:string) +AnnotationAssertion( "xsd:dateTime"^^xsd:string) +AnnotationAssertion( "xsd:string"^^xsd:string) +AnnotationAssertion(Annotation( "xsd:string"^^xsd:string) Annotation( ) "xsd:string"^^xsd:string) +AnnotationAssertion(rdfs:label "xsd:string calcareous tooth"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (dentition_type lower calcareous_tooth) AnnotationAssertion(Annotation( "'xref'"^^xsd:string) "A dentition_type calcareous_tooth that is part of a lower jaw region."^^xsd:string) @@ -69,31 +84,16 @@ AnnotationAssertion( "dentition_type lower calcareous_tooth"^^xsd:string) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -# Class: (xsd:string calcareous tooth) - -AnnotationAssertion( "A calcareous tooth that is in the right side of the bone of jaw."^^xsd:string) -AnnotationAssertion( "xsd:string"^^xsd:string) -AnnotationAssertion( "xsd:string"^^xsd:string) -AnnotationAssertion( "right__left_teeth"^^xsd:string) -AnnotationAssertion( "xsd:dateTime"^^xsd:string) -AnnotationAssertion( "xsd:string"^^xsd:string) -AnnotationAssertion( "xsd:string"^^xsd:string) -AnnotationAssertion(Annotation( "xsd:string"^^xsd:string) "xsd:string"^^xsd:string) -AnnotationAssertion(rdfs:label "xsd:string calcareous tooth"^^xsd:string) -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (xsd:string calcareous tooth) -# Class: (right calcareous tooth) - -AnnotationAssertion( "A calcareous tooth that is in the right side of the bone of jaw."^^xsd:string) -AnnotationAssertion( "xsd:string"^^xsd:string) -AnnotationAssertion( "xsd:string"^^xsd:string) +AnnotationAssertion( "A calcareous tooth that is in the right side of the jaw region."^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "right_teeth"^^xsd:string) AnnotationAssertion( "xsd:dateTime"^^xsd:string) -AnnotationAssertion( "xsd:string"^^xsd:string) AnnotationAssertion( "xsd:string"^^xsd:string) -AnnotationAssertion(Annotation( "xsd:string"^^xsd:string) "xsd:string"^^xsd:string) -AnnotationAssertion(rdfs:label "right calcareous tooth"^^xsd:string) -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +AnnotationAssertion(Annotation( "xsd:string"^^xsd:string) Annotation( ) "xsd:string"^^xsd:string) +AnnotationAssertion(rdfs:label "xsd:string calcareous tooth"^^xsd:string) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (skeleton of 'multicellular anatomical structure') @@ -120,5 +120,10 @@ AnnotationAssertion( "'multicellular anatomical structure' vein"^^xsd:string) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: () + +AnnotationAssertion( "vessel_connecting_branch_of_vessel_pattern"^^xsd:string) +SubClassOf( ObjectSomeValuesFrom( )) + ) \ No newline at end of file diff --git a/src/sparql/update_connecting_branch_of.ru b/src/sparql/update_connecting_branch_of.ru new file mode 100644 index 0000000000..f1482fea4e --- /dev/null +++ b/src/sparql/update_connecting_branch_of.ru @@ -0,0 +1,187 @@ +PREFIX UBERON: +PREFIX rdfs: +PREFIX owl: +DELETE { + ?_y owl:onProperty . +} +INSERT { + ?_y owl:onProperty . +} +WHERE{ VALUES ?structure_iri {UBERON:8410022 +UBERON:8410035 +UBERON:0005192 +UBERON:0002456 +UBERON:0001535 +UBERON:0007153 +UBERON:0006632 +UBERON:0004639 +UBERON:0002056 +UBERON:0003468 +UBERON:0006002 +UBERON:0003086 +UBERON:0001195 +UBERON:0001196 +UBERON:0001197 +UBERON:0005628 +UBERON:0001619 +UBERON:0001627 +UBERON:0001624 +UBERON:0001628 +UBERON:0000457 +UBERON:0007693 +UBERON:0001611 +UBERON:0003471 +UBERON:0010408 +UBERON:0003470 +UBERON:0001620 +UBERON:0001622 +UBERON:0015156 +UBERON:0005193 +UBERON:0001192 +UBERON:0001194 +UBERON:0005436 +UBERON:0001355 +UBERON:0002250 +UBERON:0001617 +UBERON:0010401 +UBERON:0001552 +UBERON:0002505 +UBERON:0010399 +UBERON:0002060 +UBERON:0001354 +UBERON:0002493 +UBERON:0001311 +UBERON:0001313 +UBERON:0001314 +UBERON:0001315 +UBERON:0007315 +UBERON:0005192 +UBERON:0001356 +UBERON:0001539 +UBERON:0001615 +UBERON:0004646 +UBERON:0006664 +UBERON:0001618 +UBERON:0007610 +UBERON:0001340 +UBERON:0001358 +UBERON:0008311 +UBERON:0008321 +UBERON:0008322 +UBERON:0008323 +UBERON:0001198 +UBERON:0002083 +UBERON:0035273 +UBERON:0018243 +UBERON:0035398 +UBERON:0018255 +UBERON:0035040 +UBERON:0035180 +UBERON:0014696 +UBERON:0035237 +UBERON:0035404 +UBERON:0035492 +UBERON:0035307 +UBERON:0014773 +UBERON:0015158 +UBERON:0015160 +UBERON:0014772 +UBERON:0035350 +UBERON:0035489 +UBERON:0009041 +UBERON:0013137 +UBERON:0034964 +UBERON:0010251 +UBERON:0013132 +UBERON:0035380 +UBERON:0035508 +UBERON:0015173 +UBERON:0017616 +UBERON:0017617 +UBERON:0035830 +UBERON:0039261 +UBERON:0039215 +UBERON:0009040 +UBERON:0011693 +UBERON:0034693 +UBERON:0039351 +UBERON:0035273 +UBERON:0035359 +UBERON:0035304 +UBERON:0034927 +UBERON:0035292 +UBERON:0015157 +UBERON:0035042 +UBERON:0009654 +UBERON:0010250 +UBERON:0013648 +UBERON:0014695 +UBERON:0018397 +UBERON:0035041 +UBERON:0035395 +UBERON:0034727 +UBERON:0012321 +UBERON:0010132 +UBERON:0015480 +UBERON:0012322 +UBERON:0035829} +VALUES ?o {UBERON:0001183 +UBERON:8410034 +UBERON:0001310 +UBERON:0001533 +UBERON:0002456 +UBERON:0004723 +UBERON:0001184 +UBERON:0005805 +UBERON:0001182 +UBERON:0001532 +UBERON:0001610 +UBERON:0001612 +UBERON:0001619 +UBERON:0001640 +UBERON:0002060 +UBERON:0014693 +UBERON:0010399 +UBERON:0009885 +UBERON:0018231 +UBERON:0001194 +UBERON:0001308 +UBERON:0001309 +UBERON:0001312 +UBERON:0001355 +UBERON:0001537 +UBERON:0001614 +UBERON:0001616 +UBERON:0002250 +UBERON:0007315 +UBERON:0012255 +UBERON:0005459 +UBERON:0001070 +UBERON:0001535 +UBERON:0001622 +UBERON:0001627 +UBERON:0001633 +UBERON:0012318 +UBERON:0010401 +UBERON:0001624 +UBERON:0001636 +UBERON:0002493 +UBERON:0003118 +UBERON:0001197 +UBERON:0001354 +UBERON:0001358 +UBERON:0001394 +UBERON:0001398 +UBERON:0001406 +UBERON:0001538 +UBERON:0001626 +UBERON:0004688 +UBERON:0005436 +UBERON:0007149 +UBERON:0010132} +?structure_iri a owl:Class . +?structure_iri rdfs:subClassOf ?_x . +?_x a owl:Restriction . +?_y owl:onProperty . +?_y owl:someValuesFrom ?o . +} \ No newline at end of file