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fix padding
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jonasscheid committed Feb 5, 2024
1 parent bfd98b5 commit f0d8c9e
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions bin/epaa.py
Original file line number Diff line number Diff line change
Expand Up @@ -195,8 +195,7 @@ def read_vcf(filename, pass_only=True):
SNP => seq[pos] = OBS (replace)
INSERTION => seqp[pos:pos] = obs (insert at that position)
DELETION => s = slice(pos, pos+len(ref)) (create slice that will be removed)
del seq[s] (remove)
DELETION => s = slice(pos, pos+len(ref)) (create slice that will be removed) del seq[s] (remove)
"""
for alt in alternative_list:
isHomozygous = determine_zygosity(record)
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