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Update code after nf-validation adoption #572

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Update code after nf-validation adoption

Update code after nf-validation adoption #572

Triggered via pull request October 16, 2023 21:58
@JoseEspinosaJoseEspinosa
synchronize #368
JoseEspinosa:dev
Status Failure
Total duration 47s
Artifacts –

ci.yml

on: pull_request
Matrix: Test available aligners
Matrix: Test workflow parameters
Matrix: Run pipeline with test data
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8 errors and 5 warnings
Test workflow parameters (--skip_trimming)
Process completed with exit code 1.
Test workflow parameters (--skip_consensus_peaks)
Process completed with exit code 1.
Test available aligners (star)
Process completed with exit code 1.
Test available aligners (chromap)
Process completed with exit code 1.
Test available aligners (bowtie2)
Process completed with exit code 1.
Run pipeline with test data (23.04.0)
Process completed with exit code 1.
Run pipeline with test data (latest-everything)
The job was canceled because "_23_04_0" failed.
Run pipeline with test data (latest-everything)
The operation was canceled.
Test workflow parameters (--skip_trimming)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test workflow parameters (--skip_consensus_peaks)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test available aligners (star)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test available aligners (chromap)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test available aligners (bowtie2)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/