From d4940f643dadce31db7662c9c0ed5d2e6fdd0ddd Mon Sep 17 00:00:00 2001 From: Ben Sherman Date: Thu, 6 Feb 2025 08:58:16 -0600 Subject: [PATCH] minor edits Signed-off-by: Ben Sherman --- README.md | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/README.md b/README.md index f54169d..a739de5 100644 --- a/README.md +++ b/README.md @@ -1,6 +1,6 @@ # nf-prov -Nextflow plugin to render provenance reports for pipeline runs. Now supporting [BioCompute Object](https://biocomputeobject.org/)! +Nextflow plugin to render provenance reports for pipeline runs. Now supporting [BioCompute Objects](https://biocomputeobject.org/)! ## Getting Started @@ -92,17 +92,17 @@ mv -f settings.gradle.bkp settings.gradle ./gradlew assemble # Launch -./launch.sh run test.nf -plugins nf-prov +./launch.sh run tests/test.nf ``` An alternative method to build and test the plugin for development purposes: ```bash -# builds the plugin .zip and copies it to the local ${HOME}/.nextflow/plugins, -# removing any pre-existing version +# build the plugin and install it to ${HOME}/.nextflow/plugins +# overwrites any previous installation with the same version make install -# run with an externally installed nextflow using the included test workflow & config +# run with regular nextflow install nextflow run tests/test.nf ``` @@ -133,6 +133,6 @@ Following these step to package, upload and publish the plugin: ./gradlew :plugins:nf-prov:upload ``` -4. Create a pull request against the [nextflow-io/plugins](https://github.com/nextflow-io/plugins/blob/main/plugins.json) - project to make the plugin public accessible to Nextflow app. +4. Create a pull request against the [nextflow-io/plugins](https://github.com/nextflow-io/plugins/blob/main/plugins.json) + project to make the plugin public accessible to Nextflow app.