remove duktape in favor of using nodejs for asset pipeline

.gitignore

@@ -20,6 +20,7 @@ config/bioportal_config_localhost.rb
 config/bioportal_config_stage.rb
 config/bioportal_config_prod.rb
 config/database.yml
+config/deploy/*
 config/locales/en.rb
 **.DS_Store
 /public/**/cache/**

Capfile

@@ -1,5 +1,26 @@
-load 'deploy'
-# Uncomment if you are using Rails' asset pipeline
-    # load 'deploy/assets'
-Dir['vendor/gems/*/recipes/*.rb','vendor/plugins/*/recipes/*.rb'].each { |plugin| load(plugin) }
-load 'config/deploy' # remove this line to skip loading any of the default tasks
+# Load DSL and Setup Up Stages
+require 'capistrano/setup'
+
+# Includes default deployment tasks
+require 'capistrano/deploy'
+
+# Includes tasks from other gems included in your Gemfile
+#
+# For documentation on these, see for example:
+#
+#   https://github.com/capistrano/rvm
+#   https://github.com/capistrano/rbenv
+#   https://github.com/capistrano/chruby
+#   https://github.com/capistrano/bundler
+#   https://github.com/capistrano/rails
+#
+# require 'capistrano/rvm'
+# require 'capistrano/rbenv'
+# require 'capistrano/chruby'
+require 'capistrano/bundler'
+#require 'capistrano/rails/assets'
+#require 'capistrano/rails/migrations'
+require 'capistrano/rails'
+
+# Loads custom tasks from `lib/capistrano/tasks' if you have any defined.
+Dir.glob('lib/capistrano/tasks/*.cap').each { |r| import r }

Gemfile

@@ -8,7 +8,7 @@ gem 'coffee-rails', '~> 4.1.0'
 gem 'uglifier', '>= 1.0.3'
 # See https://github.com/rails/execjs#readme for more supported runtimes
 # gem 'therubyracer', platforms: :ruby
-gem 'duktape'
+# gem 'duktape'
 
 gem 'jquery-ui-rails'
 gem 'jquery-rails'
@@ -19,10 +19,6 @@ gem 'jquery-rails'
 # To use Jbuilder templates for JSON
 # gem 'jbuilder'
 
-
-# Deploy with Capistrano
-# gem 'capistrano'
-
 # To use debugger
 # gem 'debugger'
 
@@ -55,7 +51,7 @@ gem 'logstash-logger'
 
 gem 'ontologies_api_client', :git => "https://github.com/ncbo/ontologies_api_ruby_client.git", branch: "staging"
 
-group :development do
+#group :development do
     #Capistrano
     gem 'capistrano', '~> 3.4.0', require: false
     # rails specific capistrano funcitons
@@ -64,4 +60,4 @@ group :development do
     gem 'capistrano-bundler', require: false
     # passenger reload
     gem 'capistrano-passenger', require: false
-end
+#end

Gemfile.lock

@@ -86,7 +86,6 @@ GEM
     dalli (2.7.4)
     domain_name (0.5.24)
       unf (>= 0.0.5, < 1.0.0)
-    duktape (1.2.1.0)
     erubis (2.7.0)
     excon (0.45.3)
     execjs (2.5.2)
@@ -226,7 +225,6 @@ DEPENDENCIES
   coffee-rails (~> 4.1.0)
   cube-ruby
   dalli
-  duktape
   flamegraph
   haml (~> 4.0.0)
   hpricot (~> 0.8.6)