capistrano v3.8 + appliance deployment update

Capfile

@@ -18,9 +18,12 @@ require 'capistrano/deploy'
 # require 'capistrano/rbenv'
 # require 'capistrano/chruby'
 require 'capistrano/bundler'
+require "capistrano/scm/git"
+install_plugin Capistrano::SCM::Git
 #require 'capistrano/rails/assets'
 #require 'capistrano/rails/migrations'
 require 'capistrano/rails'
+require 'capistrano/locally'
 
 # Loads custom tasks from `lib/capistrano/tasks' if you have any defined.
 Dir.glob('lib/capistrano/tasks/*.cap').each { |r| import r }

Gemfile

@@ -60,7 +60,9 @@ end
 
 group :development do
     #Capistrano
-    gem 'capistrano', '~> 3.4.1', require: false
+    gem 'capistrano', '~> 3.8.2', require: false
+    #capistrano-locally required for deployments to localhost
+    gem 'capistrano-locally', require: false
     # rails specific capistrano funcitons
     gem 'capistrano-rails', '~> 1.1.0', require: false
     # integrate bundler with capistrano

Gemfile.lock

@@ -1,6 +1,6 @@
 GIT
   remote: https://github.com/ncbo/ontologies_api_ruby_client.git
-  revision: 3ecd094615b84253cac0d81ccdc757b9d6743637
+  revision: f2a5b3ddef23b642ed8430517612c8f9d8ada91a
   branch: staging
   specs:
     ontologies_api_client (0.0.6)
@@ -59,20 +59,25 @@ GEM
       minitest (~> 5.1)
       thread_safe (~> 0.3, >= 0.3.4)
       tzinfo (~> 1.1)
+    airbrussh (1.3.0)
+      sshkit (>= 1.6.1, != 1.7.0)
     arel (6.0.4)
     autoprefixer-rails (7.1.2.3)
       execjs
     bootstrap-sass (3.3.7)
       autoprefixer-rails (>= 5.2.1)
       sass (>= 3.3.4)
     builder (3.2.3)
-    capistrano (3.4.1)
+    capistrano (3.8.2)
+      airbrussh (>= 1.0.0)
       i18n
       rake (>= 10.0.0)
-      sshkit (~> 1.3)
+      sshkit (>= 1.9.0)
     capistrano-bundler (1.2.0)
       capistrano (~> 3.1)
       sshkit (~> 1.2)
+    capistrano-locally (0.2.4)
+      capistrano (~> 3.0)
     capistrano-passenger (0.2.0)
       capistrano (~> 3.0)
     capistrano-rails (1.1.8)
@@ -243,8 +248,9 @@ PLATFORMS
 
 DEPENDENCIES
   bootstrap-sass (~> 3.3.7)
-  capistrano (~> 3.4.1)
+  capistrano (~> 3.8.2)
   capistrano-bundler
+  capistrano-locally
   capistrano-passenger
   capistrano-rails (~> 1.1.0)
   chart-js-rails
@@ -283,4 +289,4 @@ DEPENDENCIES
   will_paginate (~> 3.0)
 
 BUNDLED WITH
-   1.13.7
+   1.15.1

config/database.yml.production → config/database.yml.sample

@@ -39,4 +39,12 @@ production:
   database: bioportal_ui
   username: bp_user
   password: bp_user!!!
-  host: localhost
+  host: localhost
+
+appliance:
+  adapter: mysql
+  socket: /var/lib/mysql/mysql.sock
+  database: bioportal_ui_appliance
+  username: bp_user
+  password: bp_user!!!
+  host: localhost

config/deploy.rb

@@ -1,11 +1,10 @@
-# config valid only for Capistrano 3.1
-lock '3.4.1'
+#lock '3.7.1'
 
 set :application, 'bioportal_web_ui'
 
-set :repo_url, "git@github.com:ncbo/#{fetch(:application)}.git"
+set :repo_url, "https://github.com/ncbo/#{fetch(:application)}.git"
 
-#set :deploy_via, :remote_cache
+set :deploy_via, :remote_cache
 
 # Default branch is :master
 # ask :branch, proc { `git rev-parse --abbrev-ref HEAD`.chomp }
@@ -26,7 +25,7 @@
 # set :pty, true
 
 # Default value for :linked_files is []
-#set :linked_files, %w{config/bioportal_config.rb config/database.yml public/robots.txt config/newrelic.yml}
+#set :linked_files, %w{config/bioportal_config.rb config/database.yml public/robots.txt}
 
 # Default value for linked_dirs is []
 #set :linked_dirs, %w{bin log tmp/pids tmp/cache public/system public/assets config/locales}
@@ -49,18 +48,30 @@
 
 namespace :deploy do
 
+  desc 'display remote system env vars' 
+  task :show_remote_env do
+    on roles(:all) do
+      remote_env = capture("env")
+      puts remote_env
+    end
+  end
+
   desc 'Incorporate the bioportal_conf private repository content'
-  #Get cofiguration from repo if PRIVATE_CONFIG_REPO is set 
-  #(should be set to NCBO private config repo)
+  #Get cofiguration from repo if PRIVATE_CONFIG_REPO env var is set 
+  #or get config from local directory if LOCAL_CONFIG_PATH env var is set 
   task :get_config do
      if defined?(PRIVATE_CONFIG_REPO)
-       TMP_CONFIG_PATH = "/tmp/#{SecureRandom.hex(15)}"
        on roles(:web) do
+          TMP_CONFIG_PATH = "/tmp/#{SecureRandom.hex(15)}"
           execute "git clone -q #{PRIVATE_CONFIG_REPO} #{TMP_CONFIG_PATH}"
           execute "rsync -av #{TMP_CONFIG_PATH}/#{fetch(:application)}/ #{release_path}/"
           execute "rm -rf #{TMP_CONFIG_PATH}"
-      end
-    end
+       end
+     elsif defined?(LOCAL_CONFIG_PATH) 
+       on roles(:web) do
+          execute "rsync -av #{LOCAL_CONFIG_PATH}/#{fetch(:application)}/ #{release_path}/"
+       end
+     end
   end
 
   desc 'Restart application'
@@ -71,7 +82,6 @@
     end
   end
 
-  #before :started, :get_config
   after :updating, :get_config
   after :publishing, :restart
 

config/deploy/appliance.rb

@@ -0,0 +1,48 @@
+# Simple Role Syntax
+# ==================
+# Supports bulk-adding hosts to roles, the primary
+# server in each group is considered to be the first
+# unless any hosts have the primary property set.
+# Don't declare `role :all`, it's a meta role
+#role :app, %w{deploy@example.com}
+#role :web, %w{deploy@example.com}
+#role :db,  %w{deploy@example.com}
+
+# Extended Server Syntax
+# ======================
+# This can be used to drop a more detailed server
+# definition into the server list. The second argument
+# something that quacks like a hash can be used to set
+# extended properties on the server.
+server 'localhost', roles: %w{web db}
+
+# you can set custom ssh options
+# it's possible to pass any option but you need to keep in mind that net/ssh understand limited list of options
+# you can see them in [net/ssh documentation](http://net-ssh.github.io/net-ssh/classes/Net/SSH.html#method-c-start)
+# set it globally
+#  set :ssh_options, {
+#    keys: %w(/home/rlisowski/.ssh/id_rsa),
+#    forward_agent: false,
+#    auth_methods: %w(password)
+#  }
+# and/or per server
+# server 'example.com',
+#   user: 'user_name',
+#   roles: %w{web app},
+#   ssh_options: {
+#     user: 'user_name', # overrides user setting above
+#     keys: %w(/home/user_name/.ssh/id_rsa),
+#     forward_agent: false,
+#     auth_methods: %w(publickey password)
+#     # password: 'please use keys'
+#   }
+# setting per server overrides global ssh_options
+#
+NCBO_BRANCH = ENV.include?('NCBO_BRANCH') ? ENV['NCBO_BRANCH'] : 'master'
+set :branch, "#{NCBO_BRANCH}"
+
+#private git repo for configuraiton
+#PRIVATE_CONFIG_REPO = ENV.include?('PRIVATE_CONFIG_REPO') ? ENV['PRIVATE_CONFIG_REPO'] : 'git@github.com:your_org/private-config-repo.git'
+
+#location of configuration files
+LOCAL_CONFIG_PATH = ENV.include?('LOCAL_CONFIG_PATH') ? ENV['LOCAL_CONFIG_PATH'] : '~/virtual_appliance/appliance_config'