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inncats/multiplex-analysis-web-apps (press backspace or delete to remove)

As the incidence plot exists now, when you draw the incidence plot for a given feature-split as a percentage, I only show one half of the split. the ability to show both would be very useful
enhancement
  • djsmith17
  • Opened 
    on Sep 12, 2024
  • #144

In an effort to reduce clutter and confusion, I think it is prudent to remove the phenotype and marker columns from the feature drop down menu. Phenotypes would still be selectable from the Phenotype menu ...
enhancement
  • djsmith17
  • Opened 
    on Sep 12, 2024
  • #143

I think this figure might work better as a histogram. Id like to try building and see what it looks like.
enhancement
neighborhood profiles
  • djsmith17
  • Opened 
    on Sep 12, 2024
  • #142

When I first built the incidence plot, I instituted a very simple version of a data split, making some assumptions about the data features I would be receiving. Since then I have developed a more robust ...
enhancement
  • djsmith17
  • Opened 
    on Sep 12, 2024
  • #141

Multiplex_Image_Sample is our example dataset for working with MAWA. It doesn t really have any great outcome variables for use in downstream analysis such as the Incidence plot or separated clustering. ...
documentation
enhancement
neighborhood profiles
  • djsmith17
  • Opened 
    on Sep 11, 2024
  • #140

For some reason, there are no export buttons for the two figures in the Cluster Analyzer page. I need to add them back in and check that they are working as expected.
enhancement
neighborhood profiles
  • djsmith17
  • Opened 
    on Sep 11, 2024
  • #139

In creating documentation for the Incidence plot it made sense to discuss some real values that were in the figure, but it was hard to do so since there there no tool-tips. I think it would go a long way ...
enhancement
  • djsmith17
  • Opened 
    on Sep 11, 2024
  • #138

There have been reports of two different types of errors that show up when the clustering step is run. One is a Stopping... error. The other is the error Attempting to set identical low and high ylims ...
  • djsmith17
  • Opened 
    on Jun 11, 2024
  • #124

If its not necessary to recalculate or redraw the elbow plots, then avoid doing so. It can take a long time and has the potential to create a Stopping.... error
  • djsmith17
  • Opened 
    on Jun 11, 2024
  • #123

On a clean instantiation of MAWA, all these variables are defined in the session state, even without going to the pages on which they re used. We should only define variables as absolutely necessary and ...
enhancement
  • andrew-weisman
  • Opened 
    on May 1, 2024
  • #105
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