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Version 0.3.0

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@schlegelp schlegelp released this 05 Sep 15:44
· 4 commits to main since this release

Changes:

  • potentially breaking as it may change transform paths:
    • weights for AliasTransforms are now set to 0 (i.e. no cost)
    • weights for simple AffineTransforms are set to 0.1
  • added a new JRC2018F-FLYWIRE CMTK transform (by S. Cachero, Jefferis lab) to jefferislab/BridgingRegistrations:
    import flybrains
    # Re-run download to get the new transform
    flybrains.download_jefferislab_transforms()
  • improved the mirror transforms for FAFB14 and FLYWIRE based on the new JRC2018F-FLYWIRE transform
  • added a symmetrizing transform for FLYWIRE
  • added a VNC mesh to JRCFIB2022M: it now has .mesh (brain + VNC), .mesh_brain and .mesh_vnc
  • fixed stray vertex in FLYWIRE.mesh_whole_brain
  • some under-the-hood refactoring