diff --git a/R/prettyOncoplot.R b/R/prettyOncoplot.R index 8c07246..9d13d74 100644 --- a/R/prettyOncoplot.R +++ b/R/prettyOncoplot.R @@ -743,7 +743,7 @@ prettyOncoplot = function(maf_df, #print(range(metadata_df$NFKBIZ)) #check for missing colours - print(paste("mapping:",paste(metadataColumns,collapse = ","))) + colours = map_metadata_to_colours(metadataColumns = metadataColumns, these_samples_metadata = these_samples_metadata, annoAlpha = annoAlpha,