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major performance upgrade for get_ssm_by_regions #83

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merged 8 commits into from
Jul 9, 2024
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rdmorin
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@rdmorin rdmorin commented Apr 21, 2024

I added an option to use foverlaps to subset the bundled MAF by all specified regions at once.

@@ -51,6 +51,7 @@ get_ssm_by_regions = function(these_sample_ids = NULL,
use_name_column = FALSE,
projection = "grch37",
verbose = FALSE,
engine="default",
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Documentation for the engine parameter needs to be added.

@Kdreval Kdreval linked an issue Jul 9, 2024 that may be closed by this pull request
@Kdreval Kdreval merged commit 7f7d48e into master Jul 9, 2024
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GAMBLR.data optimization for get_ssm_by_regions
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