Updates to MIC extraction template

[caufieldjh]

No description provided.

[caufieldjh]

Reference extraction isn't working as expected - it appears to treat the refs as a numerical list rather than actually extracting from text, so if one is 20, the next is 21, and so on.

[caufieldjh]

Thinking that reference extraction may need a helper function, to work like so:

1. Define expected citation format (e.g., inline with parens plus comma or dash)
2. Given full input text + ref, get coordinates of all inline citations (no LLM)
3. Link inline citations to reflist (no LLM)
4. Do extraction with LLM and get coords of all inline citations, but do not retain numbers of citations
5. Use coords from step 2 to map refs from step 3 to results of step 4

[caufieldjh]

See also monarch-initiative/mic-ingest#5