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monarch-initiative · Oct 10, 2024 · a5238b2 · a5238b2
1 parent 21f811d
commit a5238b2
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Showing 2 changed files with 2 additions and 3 deletions.
diff --git a/src/ontogpt/clients/pubmed_client.py b/src/ontogpt/clients/pubmed_client.py
@@ -346,9 +346,7 @@ def text(
             if self.max_text_length > 0:
                 if len(doc) > self.max_text_length and not raw:
                     charnum = str(self.max_text_length)
-                    logging.warning(
-                        f'Truncating entry beginning "{doc[:50]}" to {charnum} chars'
-                    )
+                    logging.warning(f'Truncating entry beginning "{doc[:50]}" to {charnum} chars')
                     shortdoc = doc[0 : self.max_text_length]
                     txt.append(shortdoc)
                 else:

diff --git a/src/ontogpt/evaluation/ctd/eval_ctd.py b/src/ontogpt/evaluation/ctd/eval_ctd.py
@@ -19,6 +19,7 @@
 This evaluation does not account for these oddities.
 
 """
+
 import gzip
 import logging
 from collections import defaultdict