Remove MokaCAN pan numbers

moka-guys · Aug 9, 2023 · aa578fb · aa578fb
1 parent 4513ac7
commit aa578fb
Showing 1 changed file with 0 additions and 14 deletions.
diff --git a/automate_demultiplex_config.py b/automate_demultiplex_config.py
@@ -424,8 +424,6 @@
     "Pan5085",  # TSO500 High throughput Synnovis. no UTRS TERT promoter
     "Pan5112",  # TSO500 High throughput BSPS. no UTRS TERT promoter
     "Pan5114",  # TSO500 High throughput Control. no UTRS TERT promoter
-    "Pan4579",  # VCP2 M1.1 (somatic)
-    "Pan4574",  # VCP2 M1.2 (somatic)
     "Pan4042",  # STG VCP2 BRCA - TO BE REMOVED IN FUTURE UPDATE
     "Pan4043",  # STG VCP3 - TO BE REMOVED IN FUTURE UPDATE
     "Pan4044",  # STG VCP1 - TO BE REMOVED IN FUTURE UPDATE
@@ -1178,18 +1176,6 @@
         "archerdx": True,
         "congenica_upload": False,
     },
-    "Pan4574": {  # somatic VCP2 M1.2
-        "congenica_upload": False,
-        "variant_calling_bedfile": "Pan4577data.bed",
-        "hsmetrics_bedfile": "Pan5123data.bed",
-        "clinical_coverage_depth": 200,
-    },
-    "Pan4579": {  # somatic VCP2 M1.1
-        "congenica_upload": False,
-        "variant_calling_bedfile": "Pan4578data.bed",
-        "hsmetrics_bedfile": "Pan5123data.bed",
-        "clinical_coverage_depth": 200,
-    },
     "Pan4969": {  # TSO500 no UTRs. TERT promoter
         "TSO500": True,
         "sambamba_bedfile": "Pan5130dataSambamba.bed",