Merge pull request #223 from woook/multiqc_v1.6

Multiqc v1.6

README.md

@@ -41,12 +41,3 @@ This script looks for newly demultiplexed runs, uploads the fastq files, builds
 #### Alerts
 Alerts are sent to Moka-Alerts slack channel
 
-# calculate_nextseq_checksums.py
-This script is used to display a message box on the sequencers, with the goal of ensuring data is not lost (eg. by setting off another run) should the data integrity check fail. 
-
-This script is run on the sequencers. 
-The script identifies when a run has started and opens a message box asking for users not to do anything on the sequencer until the integrity check has been performed.
-If the script is running on the nextseq checksums are generated by this script and saved into the runfolder in the workstation. 
-If the script is on a miseq the script waits until the checksum files are present 
-The message box then changes displaying a message saying the sequencer can or cannot be used based on the checksum results
-

automate_demultiplex_config.py

@@ -9,7 +9,7 @@
 debug = False
 
 # =====git release for the automate_demultiplexing repo=====
-script_release = "v20.0"
+script_release = "v21.0"
 
 # =====location of input/output files=====
 # path to run folders
@@ -84,7 +84,7 @@
 # path to paddy app
 peddy_path = "Apps/peddy_v1.2"
 # path to multiqc app
-multiqc_path = "Apps/multiqc_v1.5"
+multiqc_path = "Apps/multiqc_v1.6"
 # smartsheet app
 smartsheet_path = "Apps/smartsheet_mokapipe_complete_v1.1"
 # RPKM path