Skip to content

Commit

Permalink
Update variable name
Browse files Browse the repository at this point in the history
  • Loading branch information
RachelDuffin committed Mar 29, 2023
1 parent 86eeb95 commit 5145fc3
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion upload_and_setoff_workflows.py
Original file line number Diff line number Diff line change
Expand Up @@ -1494,7 +1494,7 @@ def start_building_dx_run_cmds(self):
commands_list.append(self.create_tso500_command())
commands_list.append(self.add_to_depends_list("TSO500"))
for sample in self.list_of_processed_samples:
pannumber = re.search(r"Pan\d+", fastq).group()
pannumber = re.search(r"Pan\d+", sample).group()
commands_list.append(
self.create_fastqc_command(sample, pannumber)
)
Expand Down

0 comments on commit 5145fc3

Please sign in to comment.