Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Create demos #5

Open
wants to merge 296 commits into
base: master
Choose a base branch
from
Open

Create demos #5

wants to merge 296 commits into from

Conversation

rodsan0
Copy link
Collaborator

@rodsan0 rodsan0 commented Apr 21, 2021

No description provided.

@rodsan0 rodsan0 requested a review from mmore500 May 11, 2021 17:55
rodsan0 added 21 commits May 12, 2021 14:51
@rodsan0
Make population size a constant
7a814fb
@rodsan0
Make population size a config parameter
e0bb7ef
@rodsan0
Make filename configurable
9ed249e
@rodsan0
Exit early if threshold fitness is reached
4847ce3
@rodsan0
Comment out printing of pop fitness
920ca06
@rodsan0
Add missing comma
b93c25b
@rodsan0
Move early exit check after loop
86bf42c
@rodsan0
Initial binder/ commit
03e7d4a
@rodsan0
Execite notebooks in Github CI
ae2071c
@rodsan0
Update clear_notebooks to fix whitespace errors
386694e
@rodsan0
Update changing-enviroment notebook and clear it
9e89f92
@rodsan0
Remove Untitled notebook
655d628
@rodsan0
Ignore binder teeplots
aab8157
@rodsan0
Ignore Jupyter Notebook cache
d9a43c9
@rodsan0
Remove cache
d840827
@rodsan0
Only output time if t is valid
925984d
@rodsan0
Implement early-exit for signal-counting problem
d2aeafc
@rodsan0
Add new pip requirement
9072fb3
@rodsan0
Update binder container to Ubuntu 18.04
9a78093
@rodsan0
Build, push and use Docker container throughout CI
d6b4905
@rodsan0
Merge remote-tracking branch 'origin' into demos
b2138ff
rodsan0 added 30 commits February 10, 2022 16:28
@rodsan0
Force use of clang++ as CXX
5b2f5bd
@rodsan0
Add GIT_REVISION to Makefile
8d5edf6
@rodsan0
Remove uneeded flags from Makefile
75d3969
@rodsan0
Add git_revision function handler
62a4d94
@rodsan0
Add metadata to fitness and systematics files
65230c9
@rodsan0
Save genome as .json and metadata alongside it
89b49cb
@rodsan0
Add metadata to config
779e616
@rodsan0
Fixup jinja template
7ba94a1
@rodsan0
Fixup scripts
45cb5cd
@rodsan0
Add colon
01db77c
@rodsan0
Remove underscore CXX
4242964
@rodsan0
Fix jinja
a9b89b9
@rodsan0
Add $ to env vars
ac390e1
@rodsan0
git_revision -> sgpl_revision where it matters
4b3d84b
@rodsan0
Change log names
a8ec271
@rodsan0
Log cases passed by best-fit and overall pop
fb24e51
@rodsan0
Cache grouped set properly
56b39f0
@rodsan0
Ask for a single CPU per task
67cc43f
@rodsan0
Remove SGPL after compilation
d29576f
@rodsan0
Leave point rate constant
272423d
@rodsan0
Change "genome" to "population"
a7137a9
@rodsan0
Add old mutate
5b7b450
@rodsan0
Use old mutation by default
7ab9f98
@rodsan0
Add sequence_mut and CappedIt tests
05c2a99
@rodsan0
Make CappedIt's remaining capacity a shared_ptr
d571860
@rodsan0
Add second variation of make production
692b044
@rodsan0
Comment out unused logging in boolean-calculator
a2ecf80
@rodsan0
Serialize into std::vector to silence cereal2 errors
10216a1
@rodsan0
Add newline
ee41bd4
@rodsan0
Add tests for determinicity
3745322
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers

@mmore500 mmore500 mmore500 requested changes

Requested changes must be addressed to merge this pull request.

Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
2 participants
@rodsan0 @mmore500