Merge remote-tracking branch 'origin/R_parts' into R_parts

meono · Sep 22, 2016 · ba91436 · ba91436
2 parents 644d876 + a12de77
commit ba91436
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/iLoop_RNAseq_pipeline/master_qsub.py b/iLoop_RNAseq_pipeline/master_qsub.py
@@ -606,7 +606,7 @@ def job_organizer(project_path, groups, ref, defaults, map_to_mask, ppn='8', rea
             js = diff_job(project_path=project_path, groups=groups, quantjobsIDs=quantjobsIDs, ppn=ppn,
                           walltime='24:00:00',
                           ref=ref, defaults=defaults)
-            diffjob = job_submitter(js, job_files_path, 'job_cuffdiff.sh')
+            diffjobID = job_submitter(js, job_files_path, 'job_cuffdiff.sh')
         except Exception as ex:
             logger.error(
                 'Problem with Cuffdiff. RNAseq analysis is stopped.\nAn exception of type {} occured. Arguments:\n{}'.format(