SB Prosite scan
Annotate a DNA, RNA or protein sequence using ExPASy PROSITE website with Prosite Scan. Internet connection required. Returns a list of features associated with the locus or loci submitted to ExPasy Prosite as well as their location in the sequence.
File with DNA, RNA or protein sequences to be annotated.
optional Defaults to False. Returns results to active window. Change to True suppresses all outputs.
LOCUS Mle-Panxα2 1314 bp DNA UNA 02-JAN-2015
DEFINITION cDNA - ML25998a.
ACCESSION Mle-Panxα2
VERSION Mle-Panxα2
KEYWORDS .
SOURCE
ORGANISM . . .
.
FEATURES Location/Qualifiers
CDS order(1..144,145..307,308..555,556..688,689..810,811..1314)
/modified_by="User"
/created_by="User"
/label
splice_donor 298..307
/created_by="User"
/label="Donor"
splice_acceptor complement(495..504)
/created_by="User"
/label="Acceptor"
ORIGIN
1 atggtattgg atctcatttc tggaagcttg aatggctttt taaagatcaa gtcagttagc
61 atcgacgatc agtgggacca gattaacaga acctatttgg tcatgttttg tattttatct
121 ggtacaatca tgacctttaa acagaattta ggatcaataa tacactgtat atcggatgca
181 agaggcgacg acagttcgtt tgcggatgct catgcgacat ttgtgcaaga ctattgtgct
241 gctcaagggc tgtacacttt aaaagaagtg tatgacaagt cttggccaga tgaaattcct
301 tacccaggta ttctccaaat gaaaacaatc ggttgtttcc cggggagaca gttcaaaaac
361 ggaaccccca tccagtgccc ggacgagaaa gatctgaaac ccttcacaac ggtctatcat
421 gtctggtaca tgttcgtacc gttctacttc tgcgctgttg gcatcgcttt ttacttcccc
481 tacacggttt tcagacacct cagcggcatc tacgacatca agcctatgtt gaacagcctt
541 gccctcgaca ttggggccta cacggaggag gacataagtc gacgtataga caatgtctcg
601 aggtggttgt acatcaagtt ggatccctac atgaacaaca tgcttcctta tactcagata
661 gttcacaaac attccatctt ttacacggtg atgttggtga aggtgatgta cctagctacc
721 agtgtttcta ttttttacgc cactcaccgg atattcgacc aaggaaactt tgcactctac
781 ggatacgatg ttctaatgag cataccacag gaaacaagct ataaagtgat ggacacaatc
841 ttccctaaaa tggttggctg tgagatcaac atgtggggcc ggactggcga acagagcgaa
901 tctcttctgt gtgtcctccc tcaaaacatc ggcaaccaat acttcttcct tatattctgg
961 tttctcctga ttctcaccat actttccaac tgtatctctg taatagtgac catattcaga
1021 tttatattcg ttagtgggag ctacaaaagg ttcctggcta ccagcctctt gaatcacgaa
1081 gaacgataca agctggtgtt tacacatgtc ggcacgactg gaagatacat tttactgctc
1141 tgtgccgatc atagcaaccc caaaatattc gaggatcttc tagagatcgt ctgttccctt
1201 ctcatagcaa actatcacaa aagaaagagg agtcgggata agggacacag tcgagcggag
1261 ggggtaggga ctaaagggcg acacggtctg tcttttgtgg actcaaccgt gtga
//
$ sb Mle-Panxα2.gb -psc
DONE: 1 jobs in 29 sec
LOCUS PlU66vExDX 1314 bp DNA UNA 02-JAN-2015
DEFINITION cDNA - ML25998a.
ACCESSION PlU66vExDX
VERSION PlU66vExDX
KEYWORDS .
SOURCE
ORGANISM .
.
FEATURES Location/Qualifiers
CDS order(1..144,145..307,308..555,556..688,689..810,811..1314)
/created_by="User"
/label=""
/modified_by="User"
splice_donor 298..307
/created_by="User"
/label="Donor"
splice_acceptor complement(495..504)
/created_by="User"
/label="Acceptor"
MYRISTYL 25..39
PANNEXIN 52..1221
CK2_PHOSPHO_SIT 61..69
ASN_GLYCOSYLATI 88..96
MYRISTYL 124..138
PKC_PHOSPHO_SIT 136..141
RGD 184..189
CK2_PHOSPHO_SIT 199..207
PKC_PHOSPHO_SIT 259..264
CK2_PHOSPHO_SIT 259..267
TYR_PHOSPHO_SIT 280..303
CK2_PHOSPHO_SIT 283..291
MYRISTYL 334..348
CK2_PHOSPHO_SIT 565..573
PKC_PHOSPHO_SIT 580..585
ASN_GLYCOSYLATI 595..603
PKC_PHOSPHO_SIT 745..750
PKC_PHOSPHO_SIT 820..825
MYRISTYL 859..873
PKC_PHOSPHO_SIT 1042..1047
PKC_PHOSPHO_SIT 1120..1125
CAMP_PHOSPHO_SI 1225..1233
CK2_PHOSPHO_SIT 1252..1260
CK2_PHOSPHO_SIT 1294..1302
ORIGIN
1 atggtattgg atctcatttc tggaagcttg aatggctttt taaagatcaa gtcagttagc
61 atcgacgatc agtgggacca gattaacaga acctatttgg tcatgttttg tattttatct
121 ggtacaatca tgacctttaa acagaattta ggatcaataa tacactgtat atcggatgca
181 agaggcgacg acagttcgtt tgcggatgct catgcgacat ttgtgcaaga ctattgtgct
241 gctcaagggc tgtacacttt aaaagaagtg tatgacaagt cttggccaga tgaaattcct
301 tacccaggta ttctccaaat gaaaacaatc ggttgtttcc cggggagaca gttcaaaaac
361 ggaaccccca tccagtgccc ggacgagaaa gatctgaaac ccttcacaac ggtctatcat
421 gtctggtaca tgttcgtacc gttctacttc tgcgctgttg gcatcgcttt ttacttcccc
481 tacacggttt tcagacacct cagcggcatc tacgacatca agcctatgtt gaacagcctt
541 gccctcgaca ttggggccta cacggaggag gacataagtc gacgtataga caatgtctcg
601 aggtggttgt acatcaagtt ggatccctac atgaacaaca tgcttcctta tactcagata
661 gttcacaaac attccatctt ttacacggtg atgttggtga aggtgatgta cctagctacc
721 agtgtttcta ttttttacgc cactcaccgg atattcgacc aaggaaactt tgcactctac
781 ggatacgatg ttctaatgag cataccacag gaaacaagct ataaagtgat ggacacaatc
841 ttccctaaaa tggttggctg tgagatcaac atgtggggcc ggactggcga acagagcgaa
901 tctcttctgt gtgtcctccc tcaaaacatc ggcaaccaat acttcttcct tatattctgg
961 tttctcctga ttctcaccat actttccaac tgtatctctg taatagtgac catattcaga
1021 tttatattcg ttagtgggag ctacaaaagg ttcctggcta ccagcctctt gaatcacgaa
1081 gaacgataca agctggtgtt tacacatgtc ggcacgactg gaagatacat tttactgctc
1141 tgtgccgatc atagcaaccc caaaatattc gaggatcttc tagagatcgt ctgttccctt
1201 ctcatagcaa actatcacaa aagaaagagg agtcgggata agggacacag tcgagcggag
1261 ggggtaggga ctaaagggcg acacggtctg tcttttgtgg actcaaccgt gtga
//
>Mle-Panxα5 cDNA - ML223536a.
augaucuacugggugugggcgguguuuaaacggauggcaccuuucaagguggucacucuu
gacgacaggugggaccagaugaaccgcagcuucaugaugccgcuaaccauguccuucgcu
uaucucaucgacuaugggaucauugcaggauccacaaucaagugcacuggauuugaagau
uccuuccgaucggaagcuuuuguagacgaguacuguuggacucagggaaucuauacacug
agagaagcguacgaucucgagaacacaaaaauacccuacccagguauaauaccggaggga
uucccgaacugcaugccuuaugaaagaugggaugggaugaaaguggaaugucccaaggag
gaacaguaccugaaacccacucggguuuaucaccuauacuaucagcacauccaacucuac
uucuggcuggugugcacacucuucuaccuccccuacauggugggaaucugucuagguuuc
aacuacaccaaaccucucaucaaucuucuccacaacccucucaccagagacgaggaggag
cucgaggcucugcuggacaaagcugcccggucucugagacuccgucuggauauuuacucc
gaccagaaauccugguuugaucugcucuaccgacgacauacaauguuguaucuccucuuc
uuuaucaagcugcaguaccuuggauuuucuguagcgauucuuggucucacucaagccaag
uuuaagaucggcaacuuuguaacguauggguuugaguggguugggagucaagucccuaac
ggcuccaccuauacucuaguucaacacaaacucuucccaaagauggcugccugugagauc
aaacgcuggggagcaucagguuuagacguuuugagagggauguguguucuuccccaaaau
guuucaaacucauacaucuuucucguauucuggauuuuucuucugcucaccauccugggc
aaugucauagggugcauccugaccgugaaacaguacuuggugaaaucagaggguuacagc
aagcuuguugccuguacuuucuggaaugauuggaaucugagacauuuguauuggaaugua
ggggggucaggccgggugauucuucaucaucuggcagauaaccuccaucccuguacuuuu
gagaaacuuauuaggagguacugguggcugaagaggaacgaguauguccaguauaaugga
caucuaaagacuucuuag
$ sb Mle-Panxα4.fa -psc
Running function run_prosite() on 1 cores
DONE: 1 jobs in 41 sec
LOCUS J5elVuPaK6 1218 bp RNA UNK 01-JAN-1980
DEFINITION cDNA - ML223536a.
ACCESSION J5elVuPaK6
VERSION J5elVuPaK6
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
PANNEXIN 49..1191
CK2_PHOSPHO_SIT 58..66
ASN_GLYCOSYLATI 85..93
MYRISTYL 139..153
PKC_PHOSPHO_SIT 157..162
CK2_PHOSPHO_SIT 169..177
PKC_PHOSPHO_SIT 184..189
PKC_PHOSPHO_SIT 238..243
CK2_PHOSPHO_SIT 238..246
MYRISTYL 466..480
ASN_GLYCOSYLATI 484..492
CK2_PHOSPHO_SIT 526..534
PKC_PHOSPHO_SIT 574..579
TYR_PHOSPHO_SIT 610..630
CK2_PHOSPHO_SIT 613..621
CAMP_PHOSPHO_SI 634..642
MYRISTYL 706..720
MYRISTYL 733..747
ASN_GLYCOSYLATI 781..789
MYRISTYL 784..798
CK2_PHOSPHO_SIT 859..867
ASN_GLYCOSYLATI 901..909
MYRISTYL 961..975
MYRISTYL 973..987
PKC_PHOSPHO_SIT 985..990
PKC_PHOSPHO_SIT 1090..1095
TYR_PHOSPHO_SIT 1174..1194
ORIGIN
1 augaucuacu gggugugggc gguguuuaaa cggauggcac cuuucaaggu ggucacucuu
61 gacgacaggu gggaccagau gaaccgcagc uucaugaugc cgcuaaccau guccuucgcu
121 uaucucaucg acuaugggau cauugcagga uccacaauca agugcacugg auuugaagau
181 uccuuccgau cggaagcuuu uguagacgag uacuguugga cucagggaau cuauacacug
241 agagaagcgu acgaucucga gaacacaaaa auacccuacc cagguauaau accggaggga
301 uucccgaacu gcaugccuua ugaaagaugg gaugggauga aaguggaaug ucccaaggag
361 gaacaguacc ugaaacccac ucggguuuau caccuauacu aucagcacau ccaacucuac
421 uucuggcugg ugugcacacu cuucuaccuc cccuacaugg ugggaaucug ucuagguuuc
481 aacuacacca aaccucucau caaucuucuc cacaacccuc ucaccagaga cgaggaggag
541 cucgaggcuc ugcuggacaa agcugcccgg ucucugagac uccgucugga uauuuacucc
601 gaccagaaau ccugguuuga ucugcucuac cgacgacaua caauguugua ucuccucuuc
661 uuuaucaagc ugcaguaccu uggauuuucu guagcgauuc uuggucucac ucaagccaag
721 uuuaagaucg gcaacuuugu aacguauggg uuugaguggg uugggaguca agucccuaac
781 ggcuccaccu auacucuagu ucaacacaaa cucuucccaa agauggcugc cugugagauc
841 aaacgcuggg gagcaucagg uuuagacguu uugagaggga uguguguucu uccccaaaau
901 guuucaaacu cauacaucuu ucucguauuc uggauuuuuc uucugcucac cauccugggc
961 aaugucauag ggugcauccu gaccgugaaa caguacuugg ugaaaucaga ggguuacagc
1021 aagcuuguug ccuguacuuu cuggaaugau uggaaucuga gacauuugua uuggaaugua
1081 ggggggucag gccgggugau ucuucaucau cuggcagaua accuccaucc cuguacuuuu
1141 gagaaacuua uuaggaggua cugguggcug aagaggaacg aguaugucca guauaaugga
1201 caucuaaaga cuucuuag
//
>Mle-Panxα4 cDNA and genomic - ML129317a.
mviellagykglspfkdatvddswdqinrcyvfiamvvmgavttmrqysgtliacdgftk
fhpqfaedycwsigmytvreaydlpssmvaypgvipwdmpacvprllkngtrtkcgsekd
vmpsekiyhlwyqwasfyfwivailyyapyimfkqlgggeykplikllclasgspeqqmq
diqervvkwlffrfktyifakgyyawlrknsfsiaigvtklsyllitilvfyltgfmfey
gsntwyrygadwygtrfssyhetnnsitltkdiifpkmvaceikrwgpsgievetaqcvl
apnvlyqylflftwylliavfftnliscflhisemffsngtynrmidqgmlpdkpsyryv
fmnigaggreivqiltdnsnpllfskifddltnllittsknadvienlskldssvielgs
kdsi*
$ sb Mle-Panxα4.fa -psc
Running function run_prosite() on 1 cores
DONE: 1 jobs in 29 sec
LOCUS lT7bgiCjlX 425 aa UNK 01-JAN-1980
DEFINITION cDNA and genomic - ML129317a.
ACCESSION lT7bgiCjlX
VERSION lT7bgiCjlX
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
PANNEXIN 17..401
CK2_PHOSPHO_SIT 20..22
MYRISTYL 41..45
PKC_PHOSPHO_SIT 45..46
MYRISTYL 51..55
PKC_PHOSPHO_SIT 78..79
CK2_PHOSPHO_SIT 78..80
ASN_GLYCOSYLATI 110..112
PKC_PHOSPHO_SIT 118..119
CK2_PHOSPHO_SIT 118..120
PKC_PHOSPHO_SIT 125..126
CAMP_PHOSPHO_SI 209..211
MYRISTYL 255..259
CK2_PHOSPHO_SIT 260..262
ASN_GLYCOSYLATI 265..267
CK2_PHOSPHO_SIT 290..292
ASN_GLYCOSYLATI 340..342
PKC_PHOSPHO_SIT 357..358
PKC_PHOSPHO_SIT 399..400
ASN_GLYCOSYLATI 408..410
CK2_PHOSPHO_SIT 410..412
CK2_PHOSPHO_SIT 415..417
MYRISTYL 420..424
ORIGIN
1 mviellagyk glspfkdatv ddswdqinrc yvfiamvvmg avttmrqysg tliacdgftk
61 fhpqfaedyc wsigmytvre aydlpssmva ypgvipwdmp acvprllkng trtkcgsekd
121 vmpsekiyhl wyqwasfyfw ivailyyapy imfkqlggge ykplikllcl asgspeqqmq
181 diqervvkwl ffrfktyifa kgyyawlrkn sfsiaigvtk lsyllitilv fyltgfmfey
241 gsntwyryga dwygtrfssy hetnnsitlt kdiifpkmva ceikrwgpsg ievetaqcvl
301 apnvlyqylf lftwylliav fftnliscfl hisemffsng tynrmidqgm lpdkpsyryv
361 fmnigaggre ivqiltdnsn pllfskifdd ltnllittsk nadvienlsk ldssvielgs
421 kdsi*
//
