This repository contains data and code associated with the following manuscript accepted for publication at Cortex:
Economou, M., Vanden Bempt, F., Van Herck, S., Wouters J., Ghesquière, P., Vanderauwera, J. and Vandermosten, M. Myelin plasticity during early literacy training in at-risk pre-readers.
The manuscript can be found here: https://doi.org/10.1016/j.cortex.2023.05.023
Content:
-
Code:
- The script 01_load_data.R loads (and/or installs if needed) the required packages, defines custom helper functions and loads the dataset.
- The script 02_analysis.R performs the main analysis for the manuscript. Specifically, it fits linear (mixed-effects) models for risk-related and intervention-related comparisons and also calculates effect sizes for both baseline, as well as pre-post comparisons. This script also saves all generated output, which can further be used to extract statistics and create figures.
- The script 03_small_data.R loads raw data, as well as model output and extracts the statistics reported in the manuscript in the Results section.
- The script 04_tables_figures.R loads raw data and model output and provides the necessary commands to reproduce the tables and figures of the manuscript.
-
Data:
- The folder 'tidy' includes the raw data files that were used for statistical analysis and visualization. The file "data_rois_voxels.csv" is the main datafile containing MWF values.
- The foler 'models' contains the output of the main statistical analysis. The files can be generated by running script #02 (02_analysis.R)
-
Figs:
- This folder includes the two figures of the manuscript. To reproduce these figures, script #04 can be used (04_tables_figures.R).
Note: Every script should be standalone, such that if one wants to only generate the figures, they could directly run script #04, which will then execute every necessary previous step to generate the figures and tables.
Shield:
This work is licensed under a Creative Commons Attribution 4.0 International License.
This license allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator.