To do

[dmcglinn]

Analysis for single scale paper (subject to change after discussion)

• Add SPIE to analysis
• subset analysis on only game species of interest for commercial and recreation.

Reproducibility

• Improve README
  • provide separate work flows for each manuscript (e.g., https://github.com/MoBiodiv/elev_gradient/blob/master/README.md also see https://github.com/weecology/mete-spatial/blob/master/README.md)
  • Describe where data can be sourced from and your date of extraction - provide links and note data processing script (is this possible to automate in R?)
• ensure that each core script calls objects that are loaded (e.g., s_rarefac <- read.csv("~./fish_stability/data/s_rarefac.csv", header = T) that file doesn't exist in the data folder. Also the path should be `./data/s_rarefac.csv'
• try to provide meaningful names for files and data objects.