From c1829591e85eac2951b9ee677389a7fad9ee29ea Mon Sep 17 00:00:00 2001
From: Matthias Koenig <konigmatt@googlemail.com>
Date: Tue, 29 Sep 2020 21:36:44 +0200
Subject: [PATCH] =?UTF-8?q?Bump=20version:=200.4.0=20=E2=86=92=200.4.1?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

---
 setup.cfg                 | 60 +++++++++++++++++++--------------------
 setup.py                  |  2 +-
 src/sbmlutils/__init__.py |  2 +-
 3 files changed, 31 insertions(+), 33 deletions(-)

diff --git a/setup.cfg b/setup.cfg
index ced99318d..4ae2be969 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -1,22 +1,21 @@
 [bumpversion]
-current_version = 0.4.0
+current_version = 0.4.1
 commit = True
 tag = True
 parse = (?P<major>\d+)
 	\.(?P<minor>\d+)
 	\.(?P<patch>\d+)
 	(?P<release>[a]*)(?P<num>\d*)
-serialize =
+serialize = 
 	{major}.{minor}.{patch}{release}{num}
 	{major}.{minor}.{patch}
 tag_name = {new_version}
 
-
 [metadata]
 name = sbmlutils
 url = https://github.com/matthiaskoenig/sbmlutils
 download_url = https://pypi.org/project/sbmlutils
-project_urls =
+project_urls = 
 	Source Code = https://github.com/matthiaskoenig/sbmlutils
 	Documentation = https://sbmlutils.readthedocs.io
 	Bug Tracker = https://github.com/matthiaskoenig/sbmlutils/issues
@@ -24,7 +23,7 @@ author = Matthias Koenig
 author_email = konigmatt@googlemail.com
 maintainer = Matthias Koenig
 maintainer_email = konigmatt@googlemail.com
-classifiers =
+classifiers = 
 	Development Status :: 4 - Beta
 	Intended Audience :: Science/Research
 	License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)
@@ -33,57 +32,57 @@ classifiers =
 	Programming Language :: Python :: 3.7
 	Programming Language :: Python :: 3.8
 	Programming Language :: Python :: Implementation :: CPython
-    Topic :: Scientific/Engineering
+	Topic :: Scientific/Engineering
 	Topic :: Scientific/Engineering :: Bio-Informatics
 license = LGPL-3.0
 description = sbmlutils are utilities for working with SBML.
 long_description = file: README.rst
 long_description_content_type = text/x-rst
-keywords =
+keywords = 
 	modeling
 	standardization
-    SBML
+	SBML
 
 [options]
 zip_safe = True
 python_requires = >=3.6
-install_requires =
-    numpy>=1.19.2
-    scipy>=1.5.2
-    matplotlib>=3.3.2
-    pandas>=1.1.2
-    tabulate>=0.8.7
-    Jinja2>=2.11.2
-    requests>=2.24.0
-    beautifulsoup4>=4.9.1
-    xlrd>=1.2.0
-    xmlschema>=1.2.3
-    xmltodict>=0.12.0
-    python-libsbml-experimental>=5.18.1
-    phrasedml>=1.0.9
-    antimony>=2.12.0
-    libroadrunner>=2.0.0
-tests_require =
+install_requires = 
+	numpy>=1.19.2
+	scipy>=1.5.2
+	matplotlib>=3.3.2
+	pandas>=1.1.2
+	tabulate>=0.8.7
+	Jinja2>=2.11.2
+	requests>=2.24.0
+	beautifulsoup4>=4.9.1
+	xlrd>=1.2.0
+	xmlschema>=1.2.3
+	xmltodict>=0.12.0
+	python-libsbml-experimental>=5.18.1
+	phrasedml>=1.0.9
+	antimony>=2.12.0
+	libroadrunner>=2.0.0
+tests_require = 
 	tox
 packages = find:
-package_dir =
+package_dir = 
 	= src
 
 [options.packages.find]
 where = src
 
 [options.package_data]
-sbmlutils =
+sbmlutils = 
 	resources/*
 	test/data/*
 
 [options.extras_require]
-development =
+development = 
 	black
 	bump2version
 	isort
 	tox
-    pytest>=6.1
+	pytest>=6.1
 
 [bdist_wheel]
 universal = 1
@@ -91,7 +90,7 @@ universal = 1
 [bumpversion:part:release]
 optional_value = placeholder
 first_value = placeholder
-values =
+values = 
 	placeholder
 	a
 
@@ -102,4 +101,3 @@ replace = version="{new_version}"
 [bumpversion:file:src/sbmlutils/__init__.py]
 search = __version__ = "{current_version}"
 replace = __version__ = "{new_version}"
-
diff --git a/setup.py b/setup.py
index f2f550578..11e9c51f2 100644
--- a/setup.py
+++ b/setup.py
@@ -3,4 +3,4 @@
 
 
 if __name__ == "__main__":
-    setup(version="0.4.0")
+    setup(version="0.4.1")
diff --git a/src/sbmlutils/__init__.py b/src/sbmlutils/__init__.py
index f990c60a4..5ffcc0ff1 100644
--- a/src/sbmlutils/__init__.py
+++ b/src/sbmlutils/__init__.py
@@ -1,7 +1,7 @@
 from pathlib import Path
 
 __author__ = "Matthias Koenig"
-__version__ = "0.4.0"
+__version__ = "0.4.1"
 
 program_name = "sbmlutils"