Understanding the JSON files

Table of Contents

• Parse
• Filter
• Cluster
• Split

Parse

{
    "3cgs_A": {
        "release_date": "2008-07-01",
        "structure_method": "x-ray diffraction",
        "resolution": 1.65,
        "length": 12,
        "sequence": "GCGCGUAGUAGC"
    },
    "3cgs_B": {
        "release_date": "2008-07-01",
        "structure_method": "x-ray diffraction",
        "resolution": 1.65,
        "length": 13,
        "sequence": "CGCUACUGACGCG"
    }
}

Filter

{
    "7tqv_G": {
        "release_date": "2022-03-23",
        "structure_method": "electron microscopy",
        "resolution": 3.43,
        "length": 52,
        "sequence": "GGAGGUAGUAGGUUGUAUAGUAGUAAGACCAGACCCUAGACCAAUUCAUGCC"
    },
    "7tqv_H": {
        "release_date": "2022-03-23",
        "structure_method": "electron microscopy",
        "resolution": 3.43,
        "length": 52,
        "sequence": "GGCAUGAAUUGGUCUAGGGUCUGGUCUUACUACUAUACAACCUACUACCUCC"
    }
}

Cluster

{
    "component_1": {
        "7ssn_5": {
            "7ssn_5": {
                "release_date": "2022-02-23",
                "structure_method": "electron microscopy",
                "resolution": 3.2,
                "length": 77,
                "sequence": "CGGCGAGUAGCGCAGCUUGGUAGCGCAACUGGUUUGGGACCAGUGGGUCGGAGGUUCGAAUCCUCUCUCGCCGACCA"
            },
            "7lv0_5": {
                "release_date": "2021-07-28",
                "structure_method": "electron microscopy",
                "resolution": 3.2,
                "length": 77,
                "sequence": "CGGCGAGUAGCGCAGCUUGGUAGCGCAACUGGUUUGGGACCAGUGGGUCGGAGGUUCGAAUCCUCUCUCGCCGACCA"
            }
        }
    }
}

Split

{
    "train_set": {
        "component_1": {
            "7ssn_5": {
                "7ssn_5": {
                    "release_date": "2022-02-23",
                    "structure_method": "electron microscopy",
                    "resolution": 3.2,
                    "length": 77,
                    "sequence": "CGGCGAGUAGCGCAGCUUGGUAGCGCAACUGGUUUGGGACCAGUGGGUCGGAGGUUCGAAUCCUCUCUCGCCGACCA"
                },
                "7lv0_5": {
                    "release_date": "2021-07-28",
                    "structure_method": "electron microscopy",
                    "resolution": 3.2,
                    "length": 77,
                    "sequence": "CGGCGAGUAGCGCAGCUUGGUAGCGCAACUGGUUUGGGACCAGUGGGUCGGAGGUUCGAAUCCUCUCUCGCCGACCA"
                }
            }
        }
    }
}