.gitignore

*.py[cod]
*.npy

#temporary files
*~

# C extensions
*.so
*.build

#matlab
*.mat

#pycharm
.idea/

#eclipse
.settings/

# Cython created C files
*.c
*.cpp

# redis
dump.rdb

# IPython checkpoints (these are actually pretty useless to me)
.ipynb_checkpoints/

# Packages
*.egg
*.egg-info
dist
build
eggs
parts
bin
var
sdist
develop-eggs
.installed.cfg
lib
lib64
__pycache__
.cache

# Installer logs
pip-log.txt

# Unit test / coverage reports
.coverage
.tox
nosetests.xml

# Translations
*.mo

# Mr Developer
.mr.developer.cfg
.project
.pydevproject

#images
#*.png
Thumbs.db

*.swp

#documentation
doc/_build

# data
data/raw
data/figures

# osx
.DS_Store

# coverage
coverage_py.xml
coverage.xml

# examples
doc/example/tmp
doc/example/amici_models/*

# store
*.hdf5
*.csv

# general
data/.snakemake
data/.spyderproject
data/.spyproject
data/processed
examples/*.err
examples/*.out
doc/*.log
*.kdev*
.pytest_cache
dask-worker-space
*.lock
venv/*
*.tmp
tmp/*
*/tmp/*
amici_models/*
test/doc/example/tmp/benchmark-models/
test/amici_models/*
*.hdf5
*.h5
*.dat
/BioNetGen-*.*.*
/bionetgen.tar
/report.log