address #26

lucidrains · May 14, 2023 · 3cbcd94 · 3cbcd94
1 parent e3aeba1
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/README.md b/README.md
@@ -249,7 +249,7 @@ loss.backward()
 
 ## Data
 
-You can use the `GenomicIntervalDataset` to easily fetch sequences of any length from a `.bed` file, with greater context length dynamically computed if specified
+You can use the `GenomicIntervalDataset` to easily fetch sequences of any length from a <a href="https://genome.ucsc.edu/FAQ/FAQformat.html#format1">`.bed`</a> file, with greater context length dynamically computed if specified
 
 ```python
 import torch

diff --git a/enformer_pytorch/data.py b/enformer_pytorch/data.py
@@ -188,7 +188,7 @@ def __init__(
         bed_path = Path(bed_file)
         assert bed_path.exists(), 'path to .bed file must exist'
 
-        df = pl.read_csv(str(bed_path), sep = '\t', has_header = False)
+        df = pl.read_csv(str(bed_path), separator = '\t', has_header = False)
         df = filter_df_fn(df)
         self.df = df
 

diff --git a/setup.py b/setup.py
@@ -4,7 +4,7 @@
   name = 'enformer-pytorch',
   packages = find_packages(exclude=[]),
   include_package_data = True,
-  version = '0.7.3',
+  version = '0.7.4',
   license='MIT',
   description = 'Enformer - Pytorch',
   author = 'Phil Wang',