INSTALL

BedAnno version 0.40
====================

This module is built for annotating the variations on hg19, by
a well formatted bed format annotation database.
please see README.md for more information.

Current version of module is v0.31, please feel free to report bugs
to me, and improvements advices are the most preciated.

INSTALLATION

To install this module type the following:

   perl Makefile.PL
   make
   make test
   make install

DEPENDENCIES

This module use tabix to extract bed infomation, so the tabix should be installed,
sample bed format database is attached in data dir, together with the coding seq fasta
which have been indexed.

COPYRIGHT AND LICENCE

Copyright (C) 2013 by Liu Tao <liutao@genomics.cn>

This library is free software; you can redistribute it and/or modify
it under the same terms as Perl itself, either Perl version 5.10.1 or,
at your option, any later version of Perl 5 you may have available.

ACKNOWLEDGEMENT

Thanks Zhu Yaping, Liu Fengxia, Liu Hui for testing most of methods.