DESCRIPTION

Package: ddtlcm
Type: Package
Title: Latent Class Analysis with Dirichlet Diffusion Tree Process Prior
Version: 0.2.1
Date: 2024-03-26
Authors@R: c(
     person("Mengbing", "Li", 
            email="mengbing@umich.edu",
            role=c("cre","aut"),
            comment = c(ORCID = "0000-0002-2264-8006")),
     person("Briana", "Stephenson", 
            email="bstephenson@hsph.harvard.edu",
            role=c("ctb")),
     person("Zhenke", "Wu", 
            email="zhenkewu@umich.edu",
            role=c("ctb"),
            comment = c(ORCID = "0000-0001-7582-669X"))
     )
Maintainer: Mengbing Li <mengbing@umich.edu>
Description: Implements a Bayesian algorithm for overcoming weak separation in Bayesian latent class analysis. 
    Reference: Li et al. (2023) <arXiv:2306.04700>.
Depends:
    R(>= 4.3)
biocViews:
Imports:
    ape (>= 5.6-2),
    data.table (>= 1.14.4),
    extraDistr (>= 1.9.1),
    ggplot2 (>= 3.4.0),
    ggpubr (>= 0.6.0),
    ggtext (>= 0.1.2),
    ggtree (>= 3.4.0),
    label.switching (>= 1.8),
    matrixStats (>= 0.62.0),
    methods (>= 4.2.3),
    phylobase (>= 0.8.10),
    poLCA (>= 1.6.0.1),
    testthat (>= 3.1.7),
    truncnorm (>= 1.0-8),
    BayesLogit (>= 2.1),
    Matrix (>= 1.5-1),
    Rdpack (>= 2.5),
    R.utils (>= 2.12.2)
Suggests:
    knitr,
    parallel,
    rmarkdown,
    xfun
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
VignetteBuilder: knitr
RoxygenNote: 7.3.1
URL: https://github.com/limengbinggz/ddtlcm
BugReports: https://github.com/limengbinggz/ddtlcm/issues
Roxygen: list(markdown = TRUE)
Config/testthat/edition: 3