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feat: new periodic search #25

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merged 2 commits into from
Jul 24, 2024
Merged

feat: new periodic search #25

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b88182d
fix: old scipy interp2d deps replaced by numpy nearest neighbors + Co…
lgrcia Jul 24, 2024
6356b40
docs: update notebooks
lgrcia Jul 24, 2024
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2 changes: 1 addition & 1 deletion .vscode/settings.json
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Expand Up @@ -4,7 +4,7 @@
"editor.defaultFormatter": "ms-python.black-formatter",
"editor.formatOnSave": true,
"editor.codeActionsOnSave": {
"source.organizeImports": true
"source.organizeImports": "explicit"
},
},
"python.testing.pytestArgs": [
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1 change: 1 addition & 0 deletions docs/index.md
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Expand Up @@ -69,6 +69,7 @@ examples.md
:maxdepth: 1
:caption: Tutorials

notebooks/tutorials/GP_optimization.ipynb
notebooks/tutorials/ground_based.ipynb
notebooks/tutorials/tess_search.ipynb
notebooks/tutorials/exocomet.ipynb
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85 changes: 70 additions & 15 deletions docs/notebooks/combined.ipynb
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30 changes: 15 additions & 15 deletions docs/notebooks/motivation.ipynb
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8 changes: 4 additions & 4 deletions docs/notebooks/multi.ipynb
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Expand Down Expand Up @@ -380,7 +380,7 @@
},
{
"cell_type": "code",
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"execution_count": 9,
"metadata": {
"tags": [
"hide-input"
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58 changes: 40 additions & 18 deletions docs/notebooks/periodic.ipynb
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21 changes: 11 additions & 10 deletions docs/notebooks/single.ipynb
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14 changes: 7 additions & 7 deletions docs/notebooks/star.ipynb
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},
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"metadata": {},
"outputs": [],
"source": [
Expand All @@ -36,7 +36,7 @@
},
{
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"metadata": {},
"outputs": [
{
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},
{
"cell_type": "code",
"execution_count": 18,
"execution_count": 3,
"metadata": {},
"outputs": [
{
Expand All @@ -93,7 +93,7 @@
" 0.9370029 , 0.95199615, 0.96747702, 0.98346971, 1. ])"
]
},
"execution_count": 18,
"execution_count": 3,
"metadata": {},
"output_type": "execute_result"
}
Expand All @@ -113,7 +113,7 @@
},
{
"cell_type": "code",
"execution_count": 20,
"execution_count": 4,
"metadata": {},
"outputs": [
{
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"0.5242080656950339"
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},
"execution_count": 20,
"execution_count": 4,
"metadata": {},
"output_type": "execute_result"
}
Expand All @@ -148,7 +148,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.11.5"
"version": "3.10.14"
}
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"nbformat": 4,
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6 changes: 3 additions & 3 deletions docs/notebooks/templates.ipynb
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19 changes: 1 addition & 18 deletions docs/notebooks/tutorials/GP_optimization.ipynb
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8 changes: 4 additions & 4 deletions docs/notebooks/tutorials/exocomet.ipynb
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Expand Up @@ -265,7 +265,7 @@
},
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Expand Down Expand Up @@ -389,7 +389,7 @@
"name": "stderr",
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"text": [
"100%|██████████| 17458/17458 [00:27<00:00, 643.46it/s]\n"
"100%|██████████| 17458/17458 [00:22<00:00, 771.74it/s]\n"
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Expand All @@ -410,7 +410,7 @@
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115 changes: 86 additions & 29 deletions docs/notebooks/tutorials/ground_based.ipynb
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30 changes: 19 additions & 11 deletions docs/notebooks/tutorials/tess_search.ipynb
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Expand Up @@ -38,7 +38,7 @@
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Expand Down Expand Up @@ -73,7 +73,7 @@
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Expand Down Expand Up @@ -154,7 +154,7 @@
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Expand All @@ -180,7 +180,7 @@
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Expand Down Expand Up @@ -241,13 +241,13 @@
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Expand All @@ -300,7 +300,7 @@
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Expand All @@ -314,7 +314,7 @@
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Expand All @@ -324,6 +324,14 @@
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"/opt/homebrew/Caskroom/miniforge/base/envs/nuance/lib/python3.10/site-packages/multiprocess/popen_fork.py:66: RuntimeWarning: os.fork() was called. os.fork() is incompatible with multithreaded code, and JAX is multithreaded, so this will likely lead to a deadlock.\n",
" self.pid = os.fork()\n"
]
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Expand All @@ -341,7 +349,7 @@
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"outputs": [
{
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