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jdstamp committed Jan 6, 2025
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# The Sparse Marginal Epistasis test <img src="man/figures/logo.png" align="right" height="200" alt="" />
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The `sme` package implements a computationally and statistically
efficient method for detecting marginal epistasis in genome-wide
association studies (GWAS). Find the full package documentation
including examples and articles here: [Sparse Marginal Epistasis
test Documentation](https://lcrawlab.github.io/sme/).
including examples and articles here: [Sparse Marginal Epistasis test
Documentation](https://lcrawlab.github.io/sme/).

## Key Features

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For OS X and Linux, the OpenMP library can be installed via one of the
(shell) commands specified below:

| System | Command |
|:---|:---|
| **OS X (using Homebrew)** | `brew install libomp` |
| System | Command |
|:--------------------------------------------|:----------------------------------|
| **OS X (using Homebrew)** | `brew install libomp` |
| **Debian-based systems (including Ubuntu)** | `sudo apt-get install libomp-dev` |

To enable openMP, it may be necessary to configure the compiler flags
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