Version 1.0.2

• Modification of the ouput files:
  • Add bin coverage based on the depth file given in the bin_summary file.
  • Add a final bin column in the contig data file after the validation to specify the name of the final bin of the contig. A "ND" value is given if the contig isn't binned.
  • Add the pairs file of the alignment to be able to produce HiC matrices from it using hicstuff for example.
  • Add a log file with all information of the run.
  • With the pipeline workflow remove intermediate contig data files.
• Modify call to input data to use only header names and not order of the column.
• Change the parameter of the bowtie2 alignement back to --very-sensitive-local.
• Add the total size of the different category of bins in the log.
• Correct minor issues in the doc.