Releases: katehyerinjeon/pynrm
Releases · katehyerinjeon/pynrm
v0.1.2
v0.1.2 includes:
plot_inbreeding_by_gen
method inSimulator
class that plots the average inbreeding coefficients by generation.plot_ebv_by_gen
method inSimulator
class that plots the average estimated breeding values by generation.export_to_csv
method inSimulator
class that writes pedigree data to csv file.
v0.1.1
v0.1.1 includes:
get_avg_inbreeding
method that computes the average inbreeding rate of a given generation.get_avg_ebv
method inPedigree
class that computes the average EBV of a given generation.- Bug fix in
reproduce
method inSimulation
class
v0.1.0
v0.1.0 includes:
Pedigree
class that contains generation number, sire id, dam id, estimated breeding value, and sex information for each animal. It usespandas.DataFrame
type to hold data.Simulation
class that executes simulation of generational reproductive cycles. It has an instance variable of typePedigree
and updates it whenever a new generation is reproduced.get_nrm
method that computes the value of numerator relationship matrix given a pedigree.