Skip to content

Latest commit

 

History

History
45 lines (33 loc) · 1.16 KB

port_to_codeocean.md

File metadata and controls

45 lines (33 loc) · 1.16 KB

Notes of uploading this repo to CodeOcean

  1. Copy all the data in ./public_data into /data in CodeOcean repository.

  2. Delete ./experiment folder.

  3. In the jupyter notebook starter file, add the following setup setting:

python setup_spice.py ngspice /results /results
  1. Post-installation scripts
pip install git+https://github.com/kanhua/pypvcell.git
ln -s ../data/ ../code/public_data/
export PYTHONPATH=$PYTHONPATH:"/code"
python setup_spice.py ngspice /results /results
  1. In convert_nb.sh, change output_folder to
output_folder="/results/"

#!/usr/bin/env bash
set -ex

mkdir -p ../code/public_data
ln -s ../data/public_data/ ../code/public_data/
ln -s ../data/concentrated_3j_iv.csv ../code/concentrated_3j_iv.csv
ln -s ../data/example_ray.csv ../code/tests/example_ray.csv

# This is the master script for the capsule. When you click "Reproducible Run", the code in this file will execute.
bash run_demo_suites.sh 

jupyter nbconvert \
  --ExecutePreprocessor.allow_errors=True \
  --ExecutePreprocessor.timeout=-1 \
  --output-dir=../results \
  --execute 'network simulation demo.ipynb'