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nano-wgs-env.yaml
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name: nano-wgs-env
channels:
- bioconda
- conda-forge
- defaults
- default
- r
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_llvm
- _r-mutex=1.0.1=anacondar_1
- abseil-cpp=20200225.2=he1b5a44_2
- arrow-cpp=0.16.0=py37h989c1cb_2
- aws-sdk-cpp=1.7.164=hc831370_1
- binutils_impl_linux-64=2.33.1=h53a641e_8
- binutils_linux-64=2.33.1=h9595d00_16
- bioconductor-biobase=2.46.0=r36h516909a_0
- bioconductor-biocgenerics=0.32.0=r36_0
- bioconductor-biocparallel=1.20.0=r36he1b5a44_0
- bioconductor-biostrings=2.54.0=r36h516909a_0
- bioconductor-cghbase=1.46.0=r36_0
- bioconductor-cghcall=2.48.0=r36_0
- bioconductor-dnacopy=1.60.0=r36h6e990d7_0
- bioconductor-genomeinfodb=1.22.0=r36_0
- bioconductor-genomeinfodbdata=1.2.2=r36_0
- bioconductor-genomicranges=1.38.0=r36h516909a_0
- bioconductor-impute=1.60.0=r36h6e990d7_0
- bioconductor-iranges=2.20.0=r36h516909a_0
- bioconductor-limma=3.42.0=r36h516909a_0
- bioconductor-marray=1.64.0=r36_0
- bioconductor-qdnaseq=1.22.0=r36_0
- bioconductor-qdnaseq.hg19=1.16.0=r36_0
- bioconductor-rhtslib=1.18.0=r36hdb70ac9_1
- bioconductor-rsamtools=2.2.0=r36he1b5a44_0
- bioconductor-s4vectors=0.24.0=r36h516909a_0
- bioconductor-xvector=0.26.0=r36h516909a_0
- bioconductor-zlibbioc=1.32.0=r36h516909a_0
- biopython=1.76=py37h516909a_0
- boost-cpp=1.72.0=h8e57a91_0
- brotli=1.0.9=he1b5a44_3
- bwidget=1.9.14=0
- bzip2=1.0.8=h516909a_2
- c-ares=1.11.0=h470a237_1
- ca-certificates=2020.12.5=ha878542_0
- cairo=1.16.0=hfb77d84_1002
- certifi=2020.12.5=py37h89c1867_1
- curl=7.68.0=hf8cf82a_0
- cycler=0.10.0=py_2
- dbus=1.13.6=he372182_0
- decorator=4.4.1=py_0
- deeptools=3.3.2=py_1
- deeptoolsintervals=0.1.9=py37h516909a_0
- deprecated=1.2.12=pyh44b312d_0
- expat=2.2.9=he1b5a44_2
- fontconfig=2.13.1=h86ecdb6_1001
- freetype=2.10.0=he983fc9_1
- fribidi=1.0.5=h516909a_1002
- gcc_impl_linux-64=7.3.0=hd420e75_5
- gcc_linux-64=7.3.0=h553295d_16
- gettext=0.19.8.1=hc5be6a0_1002
- gflags=2.2.2=he1b5a44_1004
- gfortran_impl_linux-64=7.3.0=hdf63c60_5
- gfortran_linux-64=7.3.0=h553295d_16
- glib=2.58.3=py37h6f030ca_1002
- glog=0.4.0=h49b9bf7_3
- graphite2=1.3.13=hf484d3e_1000
- grpc-cpp=1.28.1=h8e748ff_2
- gsl=2.6=h294904e_0
- gst-plugins-base=1.14.5=h0935bb2_2
- gstreamer=1.14.5=h36ae1b5_2
- gxx_impl_linux-64=7.3.0=hdf63c60_5
- gxx_linux-64=7.3.0=h553295d_16
- harfbuzz=2.4.0=h9f30f68_3
- htslib=1.9=h244ad75_9
- icu=64.2=he1b5a44_1
- joypy=0.2.2=py_1
- jpeg=9c=h14c3975_1001
- kiwisolver=1.1.0=py37hc9558a2_0
- krb5=1.16.4=h2fd8d38_0
- ld_impl_linux-64=2.33.1=h53a641e_8
- libblas=3.8.0=15_openblas
- libcblas=3.8.0=15_openblas
- libclang=9.0.1=default_hde54327_0
- libcurl=7.68.0=hda55be3_0
- libdeflate=1.3=h516909a_0
- libedit=3.1.20170329=hf8c457e_1001
- libevent=2.1.10=hcdb4288_3
- libffi=3.2.1=he1b5a44_1006
- libgcc-ng=9.2.0=h24d8f2e_2
- libgfortran-ng=7.3.0=hdf63c60_5
- libgomp=9.2.0=h24d8f2e_2
- libiconv=1.15=h516909a_1005
- liblapack=3.8.0=15_openblas
- libllvm9=9.0.1=hc9558a2_0
- libopenblas=0.3.8=h5ec1e0e_0
- libpng=1.6.37=hed695b0_0
- libprotobuf=3.11.4=h8b12597_0
- libssh2=1.8.2=h22169c7_2
- libstdcxx-ng=9.2.0=hdf63c60_2
- libtiff=4.1.0=hc3755c2_3
- libuuid=2.32.1=h14c3975_1000
- libxcb=1.13=h14c3975_1002
- libxkbcommon=0.10.0=he1b5a44_0
- libxml2=2.9.10=hee79883_0
- llvm-openmp=9.0.1=hc9558a2_2
- lz4-c=1.8.3=he1b5a44_1001
- make=4.2.1=h14c3975_2004
- mappy=2.17=py37h84994c4_0
- matplotlib=3.1.3=py37_0
- matplotlib-base=3.1.3=py37h250f245_0
- minimap2=2.17=h8b12597_1
- nanocomp=1.13.1=py_0
- nanoget=1.16.1=py_0
- nanomath=1.2.0=py_0
- nanoplot=1.30.1=py_0
- nanoplotter=1.10.0=py_1
- ncurses=6.1=hf484d3e_1002
- networkx=2.4=py_0
- ngmlr=0.2.7=he860b03_1
- nspr=4.25=he1b5a44_0
- nss=3.47=he751ad9_0
- numpy=1.18.1=py37h95a1406_0
- openssl=1.1.1h=h516909a_0
- pandas=1.0.1=py37hb3f55d8_0
- pango=1.42.4=ha030887_1
- parasail-python=1.1.19=py37h8b12597_0
- parquet-cpp=1.5.1=2
- patsy=0.5.1=py_0
- pauvre=0.1.86=py_1
- pcre=8.44=he1b5a44_0
- pip=20.0.2=py_2
- pixman=0.38.0=h516909a_1003
- plotly=4.5.1=py_0
- psutil=5.7.3=py37hb5d75c8_0
- pthread-stubs=0.4=h14c3975_1001
- py2bit=0.3.0=py37h14c3975_2
- pyarrow=0.16.0=py37h110162e_2
- pybigwig=0.3.17=py37hc013797_0
- pyparsing=2.4.6=py_0
- pyqt=5.12.3=py37hcca6a23_1
- pysam=0.15.3=py37hbcae180_3
- python=3.7.6=h357f687_2
- python-dateutil=2.8.1=py_0
- python_abi=3.7=1_cp37m
- pytz=2019.3=py_0
- pyyaml=5.3=py37h516909a_0
- qcat=1.1.0=py_0
- qt=5.12.5=hd8c4c69_1
- r-base=3.6.2=h7ed4ef7_1
- r-bh=1.72.0_3=r36h6115d3f_0
- r-bitops=1.0_6=r36hcdcec82_1003
- r-codetools=0.2_16=r36h6115d3f_1001
- r-digest=0.6.25=r36h0357c0b_0
- r-formatr=1.7=r36h6115d3f_1
- r-futile.logger=1.4.3=r36h6115d3f_1002
- r-futile.options=1.0.1=r36h6115d3f_1001
- r-future=1.16.0=r36h6115d3f_0
- r-future.apply=1.4.0=r36h6115d3f_0
- r-globals=0.12.5=r36h6115d3f_0
- r-lambda.r=1.2.4=r36h6115d3f_0
- r-listenv=0.8.0=r36h6115d3f_0
- r-matrixstats=0.55.0=r36hcdcec82_0
- r-r.methodss3=1.8.0=r36h6115d3f_0
- r-r.oo=1.23.0=r36h6115d3f_0
- r-r.utils=2.9.2=r36h6115d3f_0
- r-rcurl=1.98_1.1=r36hcdcec82_0
- r-snow=0.4_3=r36h6115d3f_1001
- r-snowfall=1.84_6.1=r36h6115d3f_1002
- re2=2020.04.01=he1b5a44_0
- readline=8.0=hf8c457e_0
- retrying=1.3.3=py_2
- samtools=1.9=h10a08f8_12
- scipy=1.4.1=py37h921218d_0
- seaborn=0.10.0=py_1
- sed=4.7=h1bed415_1000
- setuptools=45.2.0=py37_0
- six=1.14.0=py37_0
- snappy=1.1.8=he1b5a44_3
- sniffles=1.0.11=hdbcaa40_1
- sqlite=3.30.1=hcee41ef_0
- statsmodels=0.11.1=py37h516909a_0
- svim=1.3.0=py_0
- tclap=1.2.1=h470a237_1
- thrift-cpp=0.13.0=h5aa387f_5
- tk=8.6.10=hed695b0_0
- tktable=2.10=h555a92e_3
- tornado=6.0.3=py37h516909a_4
- wheel=0.34.2=py_1
- wrapt=1.12.1=py37h4abf009_2
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.10=h516909a_0
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.9=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.4=h14c3975_1001
- yaml=0.2.2=h516909a_1
- zlib=1.2.11=h516909a_1006
- zstd=1.4.4=h3b9ef0a_1
- pip:
- pyqt5-sip==4.19.18
- pyqtwebengine==5.12.1