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@jzhoulab

Zhou Lab

Decoding genome with machine learning & AI

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  1. puffin puffin Public

    deep learning-inspired explainable sequence model for transcription initiation

    Python 89 7

  2. ddsm ddsm Public

    Dirichlet Diffusion Score Model for Biological Sequence Generation.

    Jupyter Notebook 45 8

  3. orca orca Public

    sequence-based prediction of multiscale genome structure from kilobase to whole-chromosome scale

    Python 76 20

  4. Multiplexer Multiplexer Public

    Jupyter Notebook 1

  5. quasildr quasildr Public

    Quasilinear data representations for single-cell omics data analysis

    Jupyter Notebook 42 3

  6. Seqstr Seqstr Public

    Python 4 1

Repositories

Showing 10 of 12 repositories
  • puffin Public

    deep learning-inspired explainable sequence model for transcription initiation

    jzhoulab/puffin’s past year of commit activity
    Python 89 7 0 2 Updated Sep 27, 2024
  • jzhoulab/puffin_manuscript’s past year of commit activity
    Jupyter Notebook 15 4 1 0 Updated Aug 7, 2024
  • ddsm Public

    Dirichlet Diffusion Score Model for Biological Sequence Generation.

    jzhoulab/ddsm’s past year of commit activity
    Jupyter Notebook 45 8 3 1 Updated May 1, 2024
  • orca Public

    sequence-based prediction of multiscale genome structure from kilobase to whole-chromosome scale

    jzhoulab/orca’s past year of commit activity
    Python 76 20 2 0 Updated Jan 16, 2024
  • Seqstr Public
    jzhoulab/Seqstr’s past year of commit activity
    Python 4 MIT 1 0 0 Updated Oct 25, 2023
  • jzhoulab/Multiplexer’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Aug 21, 2023
  • .github Public
    jzhoulab/.github’s past year of commit activity
    0 0 0 0 Updated Jul 10, 2023
  • quasildr Public

    Quasilinear data representations for single-cell omics data analysis

    jzhoulab/quasildr’s past year of commit activity
    Jupyter Notebook 42 BSD-3-Clause-Clear 3 1 0 Updated May 4, 2023
  • jzhoulab/Multiplexer-Manuscript’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 11, 2023
  • orca_leukemia Public

    Scoring leukemia-associated structural variants for regulatory impact

    jzhoulab/orca_leukemia’s past year of commit activity
    Python 3 0 0 0 Updated Feb 3, 2023

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