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error in kmerdist.pl #933

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oyac opened this issue Feb 13, 2025 · 0 comments
Open

error in kmerdist.pl #933

oyac opened this issue Feb 13, 2025 · 0 comments

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@oyac
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oyac commented Feb 13, 2025

Hello,

I started this new project where I already have the assemblies done per sample, and I`d like to use seqmerge mode in SQM to continue the job. I added my assemblies to the folder intermediate. I started a run, but i did not work, then i realized that i should run the 01.merge_sequential.pl. I tried, but i am getting an error, can you help me? Thanks!

syslog.txt

Error running command: /home/nioo/ohanac/.conda/envs/squeezemeta1.65/SqueezeMeta/lib/SqueezeMeta/kmerdist.pl ABE 1 >> /home/nioo/ohanac/squeezem/analyses/Adriano_terra_preta/ABE/syslog 2>&1 at /home/nioo/ohanac/.conda/envs/squeezemeta1.65/bin/01.merge_sequential.pl line 55.

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