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JavaFX implementation of a correlation network analysis tool

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CORNETTO

A fast and modern tool for analyzing microbiomes for statistical values using visualisations through a graph structure implemented in JavaFX.

Getting Started

A jar file is provided at "link". Simply run it using your favorite shell through: java -jar 'nameofjar.jar'.

Prerequisites

Cornetto requires jdk8, oracle or open jdk suffice. It is likely that we will migrate to Java 9 soon. If you want to contribute you should use IntelliJ since it includes css, fxml and scenebuilder support.

Furthermore git is our version control software of choice - hey we're on Github afterall!

Installing

There is no installing required besides running the Jar file (see above @Getting started). Some example data can be downloaded here: "link".

Simply start the program, click "File" -> "Load from" -> choose your file format and select your file. The graph building will start immediately. On the right one can find the sliders for changing the statistical values and changing how the graph is created and visualized.

Authors

See also the list of contributors who participated in this project.

License

This project is licensed under the MIT License - see the LICENSE.md file for details

Acknowledgments

We would like to thank professor Huson for giving us the opportunity to work on this exciting topic. In addition to that we are very grateful to Caner Bagci for providing a relaxed and productive working atmosphere. His support throughout the whole project was very helpful - he would answer e-mails even at midnight.

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