unify usage of nf-validation plugin

jimmyliu1326 · Oct 31, 2024 · 8b5f09e · 8b5f09e
1 parent 7ffbd44
commit 8b5f09e
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Showing 2 changed files with 8 additions and 7 deletions.
diff --git a/nextflow.config b/nextflow.config
@@ -99,7 +99,7 @@ profiles {
         shifter.enabled         = false
         charliecloud.enabled    = false
         apptainer.enabled       = false
-        docker.runOptions       = '-u $(id -u):$(id -g)'
+        docker.runOptions       = ''
     }
     singularity {
         singularity.enabled     = true
@@ -141,7 +141,8 @@ singularity.registry = 'quay.io'
 
 // Nextflow plugins
 plugins {
-    id 'nf-schema@2.0.0' // Validation of pipeline parameters and creation of an input channel from a sample sheet
+    // id 'nf-schema@2.0.0' // Validation of pipeline parameters and creation of an input channel from a sample sheet
+    id 'nf-validation@1.1.3'
 }
 
 // Export these variables to prevent local Python/R libraries from conflicting with those in the container

diff --git a/subworkflows/nf-core/utils_nfvalidation_plugin/main.nf b/subworkflows/nf-core/utils_nfvalidation_plugin/main.nf