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1. SamnSero_Nextflow SamnSero_Nextflow Public

   Bacterial Genomics Workflow for Infectious Disease Diagnostics and Surveillance

   R 4 1

2. tCANS tCANS Public

   Consensus calling for tiling amplicon nanopore sequencing

   Groovy 1

3. isPCR isPCR Public

   Rapid local alignment search by in silico PCR

   Groovy 4

4. msa-vis msa-vis Public

   Publication-grade visualizations for multiple sequence alignments

   R 1

5. SamnTrek SamnTrek Public

   Locally deployable search tool to explore local Salmonella epidemiology in a global context

   Nextflow 2