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Updated readme
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jhkorhonen committed May 2, 2016
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Expand Up @@ -3,6 +3,8 @@ MOODS 1.9.1

MOODS is a suite of algorithms for matching position weight matrices (PWM) against DNA sequences, featuring advanced matrix matching algorithms implemented in C++ that can be used to scan hundreds of matrices against chromosome-sized sequences in few seconds. MOODS has been designed with integration into large-scale python workflows in mind, but can also be used as a stand-alone analysis tool.

* MOODS 1.9.1.1 released:
* fixed installation script
* MOODS 1.9.1 released:
* introduced python commandline tool for basic analysis
* bugfixes in p-value and scanner code
Expand All @@ -15,7 +17,7 @@ Download

Download the packages here:

* Python 2.7: [MOODS-python-1.9.1.tar.gz](https://github.com/jhkorhonen/MOODS/releases/download/v1.9.1/MOODS-python-1.9.1.tar.gz)
* Python 2.7: [MOODS-python-1.9.1.1.tar.gz](https://github.com/jhkorhonen/MOODS/releases/download/v1.9.1.1/MOODS-python-1.9.1.1.tar.gz)

Currently only the Python package is available; it contains MOODS Python libraries along a commandline interface for most of the MOODS functions.

Expand All @@ -29,6 +31,14 @@ See the GitHub wiki for documentation:
* [Getting started](https://github.com/jhkorhonen/MOODS/wiki/Getting-started)


Contact
-------

For bug reports and other software issues, you can use [issue tracker](https://github.com/jhkorhonen/MOODS/issues).

* [Janne H. Korhonen](http://www.ru.is/kennarar/korhonen/) MOODS developer


Licensing
---------

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