From 4520fac6a9cdc03e4e2e13b2a3a2a29a32f2730d Mon Sep 17 00:00:00 2001 From: Jared Andrews Date: Thu, 30 May 2024 15:10:02 -0500 Subject: [PATCH] another shiny link --- README.md | 4 ++-- docs/index.rst | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index fe8aa2a..3fda242 100644 --- a/README.md +++ b/README.md @@ -8,7 +8,7 @@ [![PyPI license](https://img.shields.io/pypi/l/strprofiler.svg)](https://pypi.python.org/pypi/strprofiler/) [![DOI](https://zenodo.org/badge/523477912.svg)](https://zenodo.org/badge/latestdoi/523477912) -**STRprofiler** is a python package, CLI tool, and Shiny application to compare short tandem repeat (STR) profiles. In particular, it is designed to aid research labs in comparing models (e.g. cell lines & xenografts) generated from primary tissue samples to ensure contamination has not occurred. It includes basic checks for sample mixing and contamination and provides a simple interface to conveniently query the [Cellosaurus database via the CLASTR API](https://www.cellosaurus.org/str-search/). +**STRprofiler** is a python package, CLI tool, and [Shiny application](https://sj-bakerlab.shinyapps.io/strprofiler/) to compare short tandem repeat (STR) profiles. In particular, it is designed to aid research labs in comparing models (e.g. cell lines & xenografts) generated from primary tissue samples to ensure contamination has not occurred. It includes basic checks for sample mixing and contamination and provides a simple interface to conveniently query the [Cellosaurus database via the CLASTR API](https://www.cellosaurus.org/str-search/). **STRprofiler is intended only for research purposes.** @@ -231,7 +231,7 @@ New in v0.2.0 is `strprofiler-app`, a command that launches a Shiny application This application can provide a convenient portal to a group's STR database and can be hosted on standard Shiny servers, Posit Connect instances, or ShinyApps.io. -An example of the application can be seen [here](https:sj-bakerlab.shinyapps.io/strprofiler/). +An example of the application can be seen [here](https://sj-bakerlab.shinyapps.io/strprofiler/). ### Deploying an `strprofiler` App diff --git a/docs/index.rst b/docs/index.rst index 0b4b617..2c06782 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -13,7 +13,7 @@ STRprofiler .. image:: https://zenodo.org/badge/523477912.svg :target: https://zenodo.org/badge/latestdoi/523477912 -**STRprofiler** is a simple python utility to compare short tandem repeat (STR) profiles. +**STRprofiler** is a python package, CLI tool, and `Shiny application `__ to compare short tandem repeat (STR) profiles. In particular, it is designed to aid research labs in comparing models (e.g. cell lines or xenografts) generated from primary tissue samples to ensure authenticity. It includes basic checks for sample mixing and contamination.