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Feat featurecounts #82

Merged
merged 22 commits into from
Jan 11, 2024
Merged

Feat featurecounts #82

merged 22 commits into from
Jan 11, 2024

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iraiosub
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  • add option to count over CDS
  • updated PCA display in multiQC
  • bump STAR version
  • changed cutadapt arguments
  • tidy-up cutadapt module
  • use all adaptor-trimmed reads for mapping length analysis and useful reads calculations (instead of length-filtered)
  • renamed contaminants input param name
  • documentation updates

@iraiosub iraiosub merged commit ef18199 into main Jan 11, 2024
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@iraiosub iraiosub deleted the feat-featurecounts branch January 11, 2024 15:22
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