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Prepare for CRAN release
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igordot committed Jan 9, 2024
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6 changes: 3 additions & 3 deletions .Rbuildignore
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^\.Rproj\.user$
^LICENSE\.md$
^data-raw$
^\.travis\.yml$
^codecov\.yml$
^\.github$
^\.covrignore$
^cran-comments\.md$
^CRAN-RELEASE$
^revdep$
^_pkgdown\.yml$
^docs$
^pkgdown$
^\.github$
^index\.md$
^vignettes/db\.Rmd$
^vignettes/example-bm-seurat\.Rmd$
^CRAN-SUBMISSION$
10 changes: 4 additions & 6 deletions DESCRIPTION
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Type: Package
Package: clustermole
Title: Unbiased Single-Cell Transcriptomic Data Cell Type Identification
Version: 1.1.0.9001
Version: 1.1.1
Authors@R:
person(given = "Igor",
family = "Dolgalev",
role = c("aut", "cre"),
email = "igor.dolgalev@nyumc.org")
person("Igor", "Dolgalev", , "igor.dolgalev@nyumc.org", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-4451-126X"))
Description: Assignment of cell type labels to single-cell RNA sequencing (scRNA-seq) clusters is often a time-consuming process that involves manual inspection of the cluster marker genes complemented with a detailed literature search. This is especially challenging when unexpected or poorly described populations are present. The clustermole R package provides methods to query thousands of human and mouse cell identity markers sourced from a variety of databases.
License: MIT + file LICENSE
URL: https://igordot.github.io/clustermole/
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rmarkdown,
roxygen2,
testthat
VignetteBuilder:
knitr
biocViews:
Encoding: UTF-8
RoxygenNote: 7.2.3
VignetteBuilder: knitr
4 changes: 4 additions & 0 deletions NEWS.md
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# clustermole 1.1.1

* Updated internal GSVA and tidyselect function calls.

# clustermole 1.1.0

* Added singscore enrichment method.
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9 changes: 5 additions & 4 deletions cran-comments.md
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## Test environments

* local OS X install, R 4.0.3
* travis-ci: R 3.6, R-release, R-devel
* win-builder: R-devel
* local macOS install, R 4.3.2
* ubuntu-latest (on GitHub Actions), R 4.3, R-release, R-devel
* macOS (on GitHub Actions), R-release
* win-builder (devel)

## R CMD check results

There were no ERRORs or WARNINGs.
There were no ERRORs or WARNINGs.

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