Clean up tests

igordot · Jan 5, 2024 · be8bba8 · be8bba8
1 parent 25dcc84
commit be8bba8
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Showing 5 changed files with 1 addition and 16 deletions.
diff --git a/codecov.yml b/codecov.yml
diff --git a/tests/testthat/test-enrichment.R b/tests/testthat/test-enrichment.R
@@ -1,4 +1,3 @@
-
 # markers table
 markers_hs_tbl <- clustermole_markers(species = "hs")
 markers_mm_tbl <- clustermole_markers(species = "mm")

diff --git a/tests/testthat/test-markers.R b/tests/testthat/test-markers.R
@@ -1,4 +1,3 @@
-
 test_that("clustermole_markers() default params", {
   markers_tbl <- clustermole_markers()
   expect_s3_class(markers_tbl, "tbl_df")

diff --git a/tests/testthat/test-overlaps.R b/tests/testthat/test-overlaps.R
@@ -1,4 +1,3 @@
-
 # markers table
 markers_hs_tbl <- clustermole_markers(species = "hs")
 markers_mm_tbl <- clustermole_markers(species = "mm")

diff --git a/tests/testthat/test-utils.R b/tests/testthat/test-utils.R
@@ -1,5 +1,5 @@
-
 test_that("read_gmt() output", {
+  skip_if_offline(host = "software.broadinstitute.org")
   gmt_tbl <- read_gmt(file = "http://software.broadinstitute.org/gsea/msigdb/supplemental/scsig.all.v1.0.symbols.gmt")
   expect_s3_class(gmt_tbl, "tbl_df")
   expect_gt(nrow(gmt_tbl), 1000)