Dockerfile

# SciDB 14.12
#
# VERSION 1.0
#
#
#
#
#
#
#PORT MAPPING
#SERVICE		DEFAULT
#ssh 				22
#shim				8083s
#Postgresql 5432
#SciDB			1239


FROM ubuntu:12.04
MAINTAINER Alber Sanchez



# install
RUN apt-get -qq update && apt-get install --fix-missing -y --force-yes --allow-unauthenticated \
	openssh-server \
	sudo \
	wget \
	curl \
	libcurl4-openssl-dev \
	libxml2-dev  \
	gdebi \
	nano \
	postgresql-8.4 \
	sshpass \
	git-core \
	bzip2 \
	apt-transport-https \
	net-tools \
	imagemagick



# Set environment
RUN locale-gen en_US.UTF-8
ENV LANG en_US.UTF-8
ENV LANGUAGE en_US:en
ENV LC_ALL en_US.UTF-8
RUN env


# Configure users
RUN useradd --home /home/scidb --create-home --uid 1005 --group sudo --shell /bin/bash scidb
RUN echo 'root:xxxx.xxxx.xxxx' | chpasswd
RUN echo 'postgres:xxxx.xxxx.xxxx' | chpasswd
RUN echo 'scidb:xxxx.xxxx.xxxx' | chpasswd
RUN echo 'xxxx.xxxx.xxxx'  >> /home/scidb/pass.txt


RUN mkdir /var/run/sshd
RUN mkdir /home/scidb/data


# Configure SSH
RUN echo 'StrictHostKeyChecking no' >> /etc/ssh/ssh_config


# Configure Postgres
RUN echo 'host  all all 255.255.0.0/16   md5' >> /etc/postgresql/8.4/main/pg_hba.conf


# Add files
ADD containerSetup.sh 				/root/containerSetup.sh
ADD conf 											/root/conf
ADD installR.sh								/root/installR.sh
ADD installParallel.sh				/root/installParallel.sh
ADD installBoost_1570.sh			/root/installBoost_1570.sh
ADD installGribModis2SciDB.sh	/root/installGribModis2SciDB.sh
ADD libr_exec.so 							/root/libr_exec.so
ADD setEnvironment.sh 				/root/setEnvironment.sh
ADD iquery.conf 							/home/scidb/.config/scidb/iquery.conf
ADD installPackages.R					/home/scidb/installPackages.R
ADD startScidb.sh							/home/scidb/startScidb.sh
ADD stopScidb.sh							/home/scidb/stopScidb.sh
ADD scidb_docker.ini					/home/scidb/scidb_docker.ini
ADD downloaddata.sh 					/home/scidb/downloaddata.sh
ADD createArray.afl 					/home/scidb/createArray.afl
ADD removeArrayVersions.sh 		/home/scidb/removeArrayVersions.sh
ADD setEnvironment.sh 				/home/scidb/setEnvironment.sh
ADD reprosarefp.R							/home/scidb/reprosarefp.R
ADD rexec_sar_efp_f.R					/home/scidb/rexec_sar_efp_f.R


RUN chown -R root:root /root/*


RUN chown -R scidb:scidb /home/scidb/*


RUN chmod +x \
	/root/*.sh \
	/home/scidb/*.sh


# Restarting services
RUN stop ssh
RUN start ssh
RUN /etc/init.d/postgresql restart


EXPOSE 22
EXPOSE 8083


CMD    ["/usr/sbin/sshd", "-D"]