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MLGLUE

This Python package is an implementation of the Multilevel Generalized Likelihood Uncertainty Estimation (MLGLUE) algorithm, including some utility functions. See the MLGLUE paper here.

Installation

pip install MLGLUE

MLGLUE uses Ray for parallelization. Installation using pip install MLGLUE also installs Ray as dependency along numpy and matplotlib. Using a custom installation, please prepare an environment for Ray first as described here for version 2.2.0. The use of other versions of Ray has not been tested.

Documentation

A documentation webpage is available here or alternatively under mlglue.readthedocs.io.

Usage

MLGLUE requires the computational model to be given in the form of a callable with a specific set of arguments and returns:

def my_model(parameters, level, n_levels, run_id)
        '''
        Parameters
        ----------
        parameters : 1D list-like
                The model parameter vector.
        level : int
                The 0-based level index.
        n_levels : int
                The total number of levels in the hierarchy.
        run_id : int or str
                An identifier for the model run.

        Returns
        -------
        simulated_observation_equivalents : 1D list-like
                The simulated equivalents of the observations.
        '''

        # your model code
        # using the function parameter_to_observable_map as a placeholder
        #	for more complex models
        simulated_observation_equivalents = parameter_to_observable_map(
        	parameters
        	)

        return simulated_observation_equivalents

See the examples directory for a working implementation.