Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update macsio.rst #122

Merged
merged 9 commits into from
May 23, 2024
Merged

Update macsio.rst #122

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
9 commits
Select commit Hold shift + click to select a range
4c36ca0
Update macsio.rst
jeanbez May 20, 2024
039a0f3
Update CMakeLists.txt
jeanbez May 21, 2024
92a3a84
Update .gitlab-ci.yml
jeanbez May 21, 2024
d1fe333
Update CMakeLists.txt
jeanbez May 21, 2024
d9278f5
Update CMakeLists.txt
jeanbez May 21, 2024
f416032
Update h5bench-hdf5-develop.yml
jeanbez May 22, 2024
1c71ea7
Update h5bench-hdf5-develop-test.yml
jeanbez May 22, 2024
789876f
Update h5bench-hdf5-develop.yml
jeanbez May 23, 2024
a626ec6
Update h5bench-hdf5-develop-test.yml
jeanbez May 23, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
6 changes: 3 additions & 3 deletions .github/workflows/h5bench-hdf5-develop-test.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ on:

jobs:
h5bench:
runs-on: ubuntu-latest
runs-on: ubuntu-22.04
timeout-minutes: 60
env:
OMPI_ALLOW_RUN_AS_ROOT: 1
Expand Down Expand Up @@ -102,7 +102,7 @@ jobs:

cmake .. \
-DH5BENCH_ALL=ON
make -j 2
make
sudo make install
sudo ldconfig

Expand All @@ -121,7 +121,7 @@ jobs:
-DWITH_ASYNC_VOL:BOOL=ON \
-DCMAKE_C_FLAGS="-I$ASYNC_HOME/include -L$ASYNC_HOME/lib" \
-DH5BENCH_ALL=ON
make -j 2
make
sudo make install
sudo ldconfig

Expand Down
6 changes: 3 additions & 3 deletions .github/workflows/h5bench-hdf5-develop.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ on:

jobs:
h5bench:
runs-on: ubuntu-latest
runs-on: ubuntu-22.04
timeout-minutes: 60
env:
OMPI_ALLOW_RUN_AS_ROOT: 1
Expand Down Expand Up @@ -100,7 +100,7 @@ jobs:

cmake .. \
-DH5BENCH_ALL=ON
make -j 2
make
sudo make install
sudo ldconfig

Expand All @@ -121,7 +121,7 @@ jobs:
-DWITH_ASYNC_VOL:BOOL=ON \
-DCMAKE_C_FLAGS="-I$ASYNC_HOME/include -L$ASYNC_HOME/lib" \
-DH5BENCH_ALL=ON
make -j 2
make
sudo make install
sudo ldconfig

Expand Down
1 change: 0 additions & 1 deletion .gitlab-ci.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -130,7 +130,6 @@ metrics-perlmutter:
- export NERSC_HOST=`cat /etc/clustername`
- module load python
- module load darshan
- export LD_PRELOAD="$DARSHAN_BASE_DIR/lib/libdarshan.so"
- echo "h5bench SYNC"
- cd ${H5BENCH_BUILD_PATH}/perlmutter-metrics
- export LD_LIBRARY_PATH=$HDF5_DIR/lib:$LD_LIBRARY_PATH
Expand Down
2 changes: 1 addition & 1 deletion CMakeLists.txt
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -233,7 +233,7 @@ if(H5BENCH_E3SM)
ExternalProject_Add(h5bench_e3sm
SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/e3sm
CONFIGURE_COMMAND autoreconf -i COMMAND ${CMAKE_CURRENT_SOURCE_DIR}/e3sm/configure --prefix=${CMAKE_BINARY_DIR} --with-hdf5=${HDF5_HOME}
BUILD_COMMAND make
BUILD_COMMAND make -j 1
INSTALL_COMMAND ${CMAKE_COMMAND} -E copy src/e3sm_io ${CMAKE_BINARY_DIR}/h5bench_e3sm
BUILD_IN_SOURCE 1
LOG_CONFIGURE 1
Expand Down
4 changes: 2 additions & 2 deletions docs/source/macsio.rst
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ MACSio (Multi-purpose, Application-Centric, Scalable I/O Proxy Application) is b

MACSio in h5bench only supports the HDF5 interface. You need to have the `json-cwx <https://github.com/LLNL/json-cwx>`_ dependency library installed prior to compiling it in h5bench.

You can find more information in MACSio `GitHub repository <https://github.com/Parallel-NetCDF/E3SM-IO>`_.
You can find more information in MACSio `GitHub repository <https://github.com/LLNL/MACSio>`_.

Configuration
-------------
Expand Down Expand Up @@ -38,4 +38,4 @@ To run an instance of MACSio HDF5 benchmark you need to include the following in
"parallel_file_mode": "MIF 8",
"part_size": "1M"
}
}
}
Loading