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Update Dockerfile. Create a new yml just for compression.
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| Original file line number | Diff line number | Diff line change |
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| name: h5bench (HDF5 1.14.0) | ||
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| on: | ||
| pull_request: | ||
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| workflow_dispatch: | ||
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| jobs: | ||
| h5bench: | ||
| runs-on: ubuntu-20.04 | ||
| container: | ||
| image: hpcio/hdf5-1.14.1-compress | ||
| timeout-minutes: 60 | ||
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| steps: | ||
| - uses: actions/checkout@v2 | ||
| with: | ||
| submodules: true | ||
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| - name: Build Argobots | ||
| run: | | ||
| current="$PWD" | ||
| export ABT_DIR=$current/vol-async/argobots | ||
| cd $ABT_DIR | ||
| ./autogen.sh | ||
| ./configure --prefix=$ABT_DIR/install | ||
| make -j 8 | ||
| make install | ||
| - name: Build h5bench SYNC | ||
| run: | | ||
| current="$PWD" | ||
| export HDF5_HOME=/opt/hdf5 | ||
| mkdir build-sync | ||
| cd build-sync | ||
| cmake .. \ | ||
| -DCMAKE_C_COMPILER=$HDF5_HOME/bin/h5pcc \ | ||
| -DH5BENCH_ALL=ON | ||
| make | ||
| - name: Test h5bench SYNC write/read | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-contig-1d-small.json | ||
| - name: Test h5bench SYNC write/read 1D N_BIT filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-1d-N_BIT.json | ||
| - name: Test h5bench SYNC write/read 1D SZIP filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-1d-SZIP.json | ||
| - name: Test h5bench SYNC write/read 1D GZIP filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-1d-GZIP.json | ||
| - name: Test h5bench SYNC write/read 1D SZ3 filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-1d-SZ3.json | ||
| - name: Test h5bench SYNC write/read 1D ZFP filter | ||
| run: | | ||
| export LD_LIBRARY_PATH=/opt/zfp/installer/lib64:$LD_LIBRARY_PATH | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-1d-ZFP.json | ||
| - name: Test h5bench SYNC write/read 2D N_BIT filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-2d-N_BIT.json | ||
| - name: Test h5bench SYNC write/read 2D SZIP filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-2d-SZIP.json | ||
| - name: Test h5bench SYNC write/read 2D GZIP filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-2d-GZIP.json | ||
| - name: Test h5bench SYNC write/read 2D SZ3 filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-2d-SZ3.json | ||
| - name: Test h5bench SYNC write/read 2D ZFP filter | ||
| run: | | ||
| export LD_LIBRARY_PATH=/opt/zfp/installer/lib64:$LD_LIBRARY_PATH | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-2d-ZFP.json | ||
| - name: Test h5bench SYNC write/read 3D N_BIT filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-3d-N_BIT.json | ||
| - name: Test h5bench SYNC write/read 3D SZIP filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-3d-SZIP.json | ||
| - name: Test h5bench SYNC write/read 3D GZIP filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-3d-GZIP.json | ||
| - name: Test h5bench SYNC write/read 3D SZ3 filter | ||
| run: | | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-3d-SZ3.json | ||
| - name: Test h5bench SYNC write/read 3D ZFP filter | ||
| run: | | ||
| export LD_LIBRARY_PATH=/opt/zfp/installer/lib64:$LD_LIBRARY_PATH | ||
| cd build-sync | ||
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-chunked-3d-ZFP.json | ||
| - name: Upload artifact | ||
| if: always() | ||
| uses: actions/upload-artifact@v2 | ||
| with: | ||
| name: test | ||
| path: build*/storage/**/std* | ||
| retention-days: 1 |